Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC133104.2-201ENST00000615272 193 ntBASIC2.47□□□□□ -2.01
PCNAP12004 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.47□□□□□ -2.01
PCNAP12004 SCARNA4-201ENST00000629045 128 ntBASIC2.47□□□□□ -2.01
PCNAP12004 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.47□□□□□ -2.01
PCNAP12004 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
PCNAP12004 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCNAP12004 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PCNAP12004 Y_RNA.146-201ENST00000363549 102 ntBASIC2.46□□□□□ -2.02
PCNAP12004 RNU6-694P-201ENST00000364071 147 ntBASIC2.46□□□□□ -2.02
PCNAP12004 RNU6-99P-201ENST00000364721 107 ntBASIC2.46□□□□□ -2.02
PCNAP12004 RNU6-1040P-201ENST00000383974 107 ntBASIC2.46□□□□□ -2.02
PCNAP12004 Y_RNA.405-201ENST00000383979 100 ntBASIC2.46□□□□□ -2.02
PCNAP12004 Y_RNA.451-201ENST00000384200 100 ntBASIC2.46□□□□□ -2.02
PCNAP12004 Y_RNA.524-201ENST00000384564 100 ntBASIC2.46□□□□□ -2.02
PCNAP12004 SNORA41-201ENST00000384675 132 ntBASIC2.46□□□□□ -2.02
PCNAP12004 Y_RNA.561-201ENST00000384694 100 ntBASIC2.46□□□□□ -2.02
PCNAP12004 SNORA46.1-201ENST00000391069 153 ntBASIC2.46□□□□□ -2.02
PCNAP12004 RNA5SP201-201ENST00000410316 124 ntBASIC2.46□□□□□ -2.02
PCNAP12004 MRPS18CP6-201ENST00000423587 223 ntBASIC2.46□□□□□ -2.02
PCNAP12004 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.46□□□□□ -2.02
PCNAP12004 AC068781.1-201ENST00000488231 618 ntBASIC2.46□□□□□ -2.02
PCNAP12004 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.46□□□□□ -2.02
PCNAP12004 AC105758.1-201ENST00000506038 399 ntBASIC2.46□□□□□ -2.02
PCNAP12004 AP000889.1-201ENST00000530968 660 ntBASIC2.46□□□□□ -2.02
PCNAP12004 AL590705.4-201ENST00000532209 134 ntBASIC2.46□□□□□ -2.02
PCNAP12004 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.46□□□□□ -2.02
PCNAP12004 MIR5092-201ENST00000583139 88 ntBASIC2.46□□□□□ -2.02
PCNAP12004 AC005899.2-201ENST00000584353 90 ntBASIC2.46□□□□□ -2.02
PCNAP12004 MIR6840-201ENST00000611937 71 ntBASIC2.46□□□□□ -2.02
PCNAP12004 MIR1244-1-201ENST00000612829 85 ntBASIC2.46□□□□□ -2.02
PCNAP12004 MIR1244-3-201ENST00000635744 85 ntBASIC2.46□□□□□ -2.02
PCNAP12004 MIR1244-2-201ENST00000636449 85 ntBASIC2.46□□□□□ -2.02
PCNAP12004 MIR1244-4-202ENST00000636813 85 ntBASIC2.46□□□□□ -2.02
PCNAP12004 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.46□□□□□ -2.02
PCNAP12004 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PCNAP12004 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.45□□□□□ -2.02
PCNAP12004 AC069528.2-201ENST00000624849 1991 ntBASIC2.45□□□□□ -2.02
PCNAP12004 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCNAP12004 MTND5P10-201ENST00000603719 1809 ntBASIC2.45□□□□□ -2.02
PCNAP12004 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCNAP12004 RNU6-874P-201ENST00000362390 105 ntBASIC2.45□□□□□ -2.02
PCNAP12004 SNORA80A-201ENST00000363922 136 ntBASIC2.45□□□□□ -2.02
PCNAP12004 RNU4-56P-201ENST00000364700 142 ntBASIC2.45□□□□□ -2.02
PCNAP12004 RNU4-9P-201ENST00000364951 139 ntBASIC2.45□□□□□ -2.02
PCNAP12004 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
PCNAP12004 MIR196B-201ENST00000384852 84 ntBASIC2.45□□□□□ -2.02
PCNAP12004 SNORA12.2-201ENST00000391040 156 ntBASIC2.45□□□□□ -2.02
PCNAP12004 Y_RNA.597-201ENST00000410463 100 ntBASIC2.45□□□□□ -2.02
PCNAP12004 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.45□□□□□ -2.02
PCNAP12004 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.45□□□□□ -2.02
PCNAP12004 RNU6-307P-201ENST00000516743 106 ntBASIC2.45□□□□□ -2.02
PCNAP12004 RNU6-699P-201ENST00000517081 110 ntBASIC2.45□□□□□ -2.02
PCNAP12004 RNU6-586P-201ENST00000517265 104 ntBASIC2.45□□□□□ -2.02
PCNAP12004 AC016256.1-201ENST00000547971 354 ntBASIC2.45□□□□□ -2.02
PCNAP12004 CYP4A27P-201ENST00000567218 190 ntBASIC2.45□□□□□ -2.02
PCNAP12004 MIR4319-201ENST00000577285 85 ntBASIC2.45□□□□□ -2.02
PCNAP12004 MIR5701-3-201ENST00000578890 82 ntBASIC2.45□□□□□ -2.02
PCNAP12004 MIR3923-201ENST00000579521 83 ntBASIC2.45□□□□□ -2.02
PCNAP12004 MIR5701-1-201ENST00000585138 82 ntBASIC2.45□□□□□ -2.02
PCNAP12004 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.45□□□□□ -2.02
PCNAP12004 AL355802.3-201ENST00000607571 545 ntBASIC2.45□□□□□ -2.02
PCNAP12004 MIR5701-2-201ENST00000615634 82 ntBASIC2.45□□□□□ -2.02
PCNAP12004 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCNAP12004 RNU6-1115P-201ENST00000362490 106 ntBASIC2.44□□□□□ -2.02
PCNAP12004 RNU1-23P-201ENST00000363361 144 ntBASIC2.44□□□□□ -2.02
PCNAP12004 Y_RNA.138-201ENST00000363462 102 ntBASIC2.44□□□□□ -2.02
PCNAP12004 U8.10-201ENST00000384260 133 ntBASIC2.44□□□□□ -2.02
PCNAP12004 RNU6-1093P-201ENST00000391194 107 ntBASIC2.44□□□□□ -2.02
PCNAP12004 AC092423.1-201ENST00000430165 186 ntBASIC2.44□□□□□ -2.02
PCNAP12004 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.44□□□□□ -2.02
PCNAP12004 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.44□□□□□ -2.02
PCNAP12004 snoU13.30-201ENST00000458951 104 ntBASIC2.44□□□□□ -2.02
PCNAP12004 RPL17P19-201ENST00000489069 552 ntBASIC2.44□□□□□ -2.02
PCNAP12004 CKS1BP2-201ENST00000497342 240 ntBASIC2.44□□□□□ -2.02
PCNAP12004 MIR449C-201ENST00000516047 92 ntBASIC2.44□□□□□ -2.02
PCNAP12004 RNA5SP282-201ENST00000516355 108 ntBASIC2.44□□□□□ -2.02
PCNAP12004 HSPE1P18-201ENST00000517602 280 ntBASIC2.44□□□□□ -2.02
PCNAP12004 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.44□□□□□ -2.02
PCNAP12004 PCGEM1.1-201ENST00000613431 131 ntBASIC2.44□□□□□ -2.02
PCNAP12004 MIR5739-201ENST00000619803 80 ntBASIC2.44□□□□□ -2.02
PCNAP12004 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCNAP12004 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
PCNAP12004 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
PCNAP12004 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PCNAP12004 RNU6-222P-201ENST00000362438 107 ntBASIC2.43□□□□□ -2.02
PCNAP12004 SNORA5B-201ENST00000363786 132 ntBASIC2.43□□□□□ -2.02
PCNAP12004 RNY3P11-201ENST00000364153 102 ntBASIC2.43□□□□□ -2.02
PCNAP12004 Y_RNA.463-201ENST00000384271 102 ntBASIC2.43□□□□□ -2.02
PCNAP12004 RNU6-308P-201ENST00000390957 107 ntBASIC2.43□□□□□ -2.02
PCNAP12004 MTCYBP2-201ENST00000407745 171 ntBASIC2.43□□□□□ -2.02
PCNAP12004 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.43□□□□□ -2.02
PCNAP12004 AC063976.3-201ENST00000426849 329 ntBASIC2.43□□□□□ -2.02
PCNAP12004 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.43□□□□□ -2.02
PCNAP12004 UBE2V1P7-201ENST00000446395 340 ntBASIC2.43□□□□□ -2.02
PCNAP12004 OR2AQ1P-201ENST00000451972 200 ntBASIC2.43□□□□□ -2.02
PCNAP12004 RNA5SP356-201ENST00000515972 94 ntBASIC2.43□□□□□ -2.02
PCNAP12004 RNU6-965P-201ENST00000516721 96 ntBASIC2.43□□□□□ -2.02
PCNAP12004 RNU6-264P-201ENST00000517134 104 ntBASIC2.43□□□□□ -2.02
PCNAP12004 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.43□□□□□ -2.02
PCNAP12004 AC004584.2-201ENST00000570407 410 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms