Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 Y_RNA.490-201ENST00000384413 102 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 Y_RNA.533-201ENST00000384596 114 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 MIR196B-201ENST00000384852 84 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 NDUFB4P4-201ENST00000404822 243 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 AL355497.1-201ENST00000406262 551 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 Y_RNA.594-201ENST00000410373 140 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 RN7SKP284-201ENST00000411002 343 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 AC243428.1-201ENST00000421099 264 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 MTND4P18-201ENST00000447010 465 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 Y_RNA.635-201ENST00000459041 101 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 RN7SKP210-201ENST00000459176 261 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.33□□□□□ -2.04
UBL4AP11441 RNU7-175P-201ENST00000515915 61 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 Y_RNA.670-201ENST00000516255 105 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 RNA5SP490-201ENST00000517141 136 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.33□□□□□ -2.04
UBL4AP11441 AC026470.2-201ENST00000561492 181 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 MIR548S-201ENST00000581352 82 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 AC010928.2-201ENST00000588017 287 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 RMST_6.1-201ENST00000611980 203 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.33□□□□□ -2.04
UBL4AP11441 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
UBL4AP11441 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.32□□□□□ -2.04
UBL4AP11441 RNU6-595P-201ENST00000363944 107 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 MIR32-201ENST00000384965 70 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 MIR29C-201ENST00000385231 88 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 MIR320B2-201ENST00000408479 138 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 RNA5SP184-201ENST00000411071 108 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 AC027124.2-201ENST00000428249 105 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 Z82188.1-201ENST00000436709 154 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.32□□□□□ -2.04
UBL4AP11441 RNU6-1098P-201ENST00000516772 96 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 RNU2-44P-201ENST00000516795 194 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 RNA5SP54-201ENST00000516951 92 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 AL590705.4-201ENST00000532209 134 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.32□□□□□ -2.04
UBL4AP11441 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.32□□□□□ -2.04
UBL4AP11441 AC016727.2-201ENST00000603988 621 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 SNRPGP20-201ENST00000604477 205 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 AL359314.1-201ENST00000616913 261 ntBASIC2.32□□□□□ -2.04
UBL4AP11441 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBL4AP11441 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
UBL4AP11441 Y_RNA.99-201ENST00000363138 105 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 SNORA18.2-201ENST00000383865 132 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 Y_RNA.473-201ENST00000384333 102 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 MIR153-2-201ENST00000385225 87 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 MIR1262-201ENST00000408276 93 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.31□□□□□ -2.04
UBL4AP11441 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.31□□□□□ -2.04
UBL4AP11441 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.31□□□□□ -2.04
UBL4AP11441 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.31□□□□□ -2.04
UBL4AP11441 RNU7-14P-201ENST00000459331 62 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.31□□□□□ -2.04
UBL4AP11441 RNU6-991P-201ENST00000516168 107 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 MIR514B-201ENST00000516774 80 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 SNORA31.25-201ENST00000517242 134 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.31□□□□□ -2.04
UBL4AP11441 AC005899.2-201ENST00000584353 90 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 AL158827.2-201ENST00000602494 330 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 AC016727.1-205ENST00000605437 569 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.31□□□□□ -2.04
UBL4AP11441 AC025253.1-201ENST00000613623 543 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 TCL6_2.1-201ENST00000615162 119 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 AC005562.2-201ENST00000618264 111 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 AL691447.3-201ENST00000635020 330 ntBASIC2.31□□□□□ -2.04
UBL4AP11441 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
UBL4AP11441 BX322639.1-202ENST00000423987 2213 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 RNU1-76P-201ENST00000362903 159 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 RNU6-438P-201ENST00000365561 103 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 U8.10-201ENST00000384260 133 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 SNORD14D-201ENST00000384390 87 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 HMGN2P39-201ENST00000398005 273 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 MTND5P20-201ENST00000448677 143 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.3□□□□□ -2.04
UBL4AP11441 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.3□□□□□ -2.04
UBL4AP11441 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 AC105029.1-201ENST00000520250 669 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.3□□□□□ -2.04
UBL4AP11441 ANP32BP3-201ENST00000559213 706 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.3□□□□□ -2.04
UBL4AP11441 AC025754.2-201ENST00000606491 432 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 AC009229.3-201ENST00000608056 282 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.3□□□□□ -2.04
UBL4AP11441 AC012640.5-201ENST00000623897 319 ntBASIC2.3□□□□□ -2.04
UBL4AP11441 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.3□□□□□ -2.04
UBL4AP11441 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UBL4AP11441 Y_RNA.48-201ENST00000362710 103 ntBASIC2.29□□□□□ -2.04
UBL4AP11441 RNU6-137P-201ENST00000363680 108 ntBASIC2.29□□□□□ -2.04
UBL4AP11441 RNU6-525P-201ENST00000363685 104 ntBASIC2.29□□□□□ -2.04
UBL4AP11441 SNORD115-8-201ENST00000363856 82 ntBASIC2.29□□□□□ -2.04
UBL4AP11441 SNORD115-38-201ENST00000365037 82 ntBASIC2.29□□□□□ -2.04
UBL4AP11441 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
UBL4AP11441 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
UBL4AP11441 SNORA75.4-201ENST00000391278 119 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms