Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC109329.1-201ENST00000518744 317 ntBASIC1.61□□□□□ -2.15
RETP07949 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.61□□□□□ -2.15
RETP07949 CYCSP27-201ENST00000527643 293 ntBASIC1.61□□□□□ -2.15
RETP07949 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.61□□□□□ -2.15
RETP07949 AC023050.3-201ENST00000541142 333 ntBASIC1.61□□□□□ -2.15
RETP07949 AC090115.3-201ENST00000553218 849 ntBASIC1.61□□□□□ -2.15
RETP07949 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.61□□□□□ -2.15
RETP07949 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.61□□□□□ -2.15
RETP07949 AC068790.6-201ENST00000602558 258 ntBASIC1.61□□□□□ -2.15
RETP07949 AL078605.1-201ENST00000603529 500 ntBASIC1.61□□□□□ -2.15
RETP07949 AC004492.1-201ENST00000607036 742 ntBASIC1.61□□□□□ -2.15
RETP07949 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RETP07949 U4.5-201ENST00000617137 123 ntBASIC1.61□□□□□ -2.15
RETP07949 FER-210ENST00000628534 558 ntTSL 5 BASIC1.61□□□□□ -2.15
RETP07949 U4.7-201ENST00000638126 106 ntBASIC1.61□□□□□ -2.15
RETP07949 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RETP07949 Y_RNA.6-201ENST00000362350 114 ntBASIC1.6□□□□□ -2.15
RETP07949 RNU6-527P-201ENST00000363425 104 ntBASIC1.6□□□□□ -2.15
RETP07949 RNU6-82P-201ENST00000363970 107 ntBASIC1.6□□□□□ -2.15
RETP07949 RNU6-1090P-201ENST00000364065 94 ntBASIC1.6□□□□□ -2.15
RETP07949 Y_RNA.402-201ENST00000383972 102 ntBASIC1.6□□□□□ -2.15
RETP07949 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
RETP07949 RNA5SP219-201ENST00000390940 113 ntBASIC1.6□□□□□ -2.15
RETP07949 RNU2-32P-201ENST00000411193 191 ntBASIC1.6□□□□□ -2.15
RETP07949 MTCO1P20-201ENST00000425366 358 ntBASIC1.6□□□□□ -2.15
RETP07949 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.6□□□□□ -2.15
RETP07949 MTND3P16-201ENST00000452205 344 ntBASIC1.6□□□□□ -2.15
RETP07949 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.6□□□□□ -2.15
RETP07949 SNRPGP7-201ENST00000469016 106 ntBASIC1.6□□□□□ -2.15
RETP07949 MTCYBP40-201ENST00000509390 1135 ntBASIC1.6□□□□□ -2.15
RETP07949 RNU6-189P-201ENST00000516120 101 ntBASIC1.6□□□□□ -2.15
RETP07949 SNORD60.2-201ENST00000516883 86 ntBASIC1.6□□□□□ -2.15
RETP07949 AC109479.2-201ENST00000517842 174 ntBASIC1.6□□□□□ -2.15
RETP07949 CENPUP1-201ENST00000526649 1202 ntBASIC1.6□□□□□ -2.15
RETP07949 AC109635.3-201ENST00000529536 185 ntBASIC1.6□□□□□ -2.15
RETP07949 AC011604.1-201ENST00000545978 196 ntBASIC1.6□□□□□ -2.15
RETP07949 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.6□□□□□ -2.15
RETP07949 MIR3198-2-201ENST00000577868 80 ntBASIC1.6□□□□□ -2.15
RETP07949 BNIP3P25-201ENST00000596023 559 ntBASIC1.6□□□□□ -2.15
RETP07949 AC136443.5-201ENST00000603741 370 ntBASIC1.6□□□□□ -2.15
RETP07949 AC123912.5-201ENST00000605470 343 ntBASIC1.6□□□□□ -2.15
RETP07949 RMST_6.1-201ENST00000611980 203 ntBASIC1.6□□□□□ -2.15
RETP07949 DISC2.1-201ENST00000612827 205 ntBASIC1.6□□□□□ -2.15
RETP07949 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.6□□□□□ -2.15
RETP07949 AC098679.4-201ENST00000624241 654 ntBASIC1.6□□□□□ -2.15
RETP07949 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.6□□□□□ -2.15
RETP07949 AC068137.3-201ENST00000639191 341 ntBASIC1.6□□□□□ -2.15
RETP07949 MIR126-201ENST00000362291 85 ntBASIC1.59□□□□□ -2.15
RETP07949 Y_RNA.38-201ENST00000362617 102 ntBASIC1.59□□□□□ -2.15
RETP07949 SNORD114-26-201ENST00000363543 72 ntBASIC1.59□□□□□ -2.15
RETP07949 RNY4P14-201ENST00000363656 96 ntBASIC1.59□□□□□ -2.15
RETP07949 RNY3P3-201ENST00000363816 102 ntBASIC1.59□□□□□ -2.15
RETP07949 SNORD114-22-201ENST00000365423 72 ntBASIC1.59□□□□□ -2.15
RETP07949 Y_RNA.378-201ENST00000365652 113 ntBASIC1.59□□□□□ -2.15
RETP07949 MIR544A-201ENST00000384855 91 ntBASIC1.59□□□□□ -2.15
RETP07949 MIR514A2-201ENST00000385131 88 ntBASIC1.59□□□□□ -2.15
RETP07949 MIR514A3-201ENST00000385132 88 ntBASIC1.59□□□□□ -2.15
RETP07949 RNA5SP390-201ENST00000410191 113 ntBASIC1.59□□□□□ -2.15
RETP07949 RNU6-174P-201ENST00000410406 106 ntBASIC1.59□□□□□ -2.15
RETP07949 RNU2-23P-201ENST00000410545 195 ntBASIC1.59□□□□□ -2.15
RETP07949 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
RETP07949 MTCO1P21-201ENST00000416634 589 ntBASIC1.59□□□□□ -2.15
RETP07949 ARL5AP1-201ENST00000418991 388 ntBASIC1.59□□□□□ -2.15
RETP07949 C8orf59P1-201ENST00000429930 303 ntBASIC1.59□□□□□ -2.15
RETP07949 RPS4XP11-201ENST00000446897 772 ntBASIC1.59□□□□□ -2.15
RETP07949 RPL39P29-201ENST00000447779 157 ntBASIC1.59□□□□□ -2.15
RETP07949 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
RETP07949 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.59□□□□□ -2.15
RETP07949 RNU6-377P-201ENST00000515965 102 ntBASIC1.59□□□□□ -2.15
RETP07949 SNORA14.1-201ENST00000516113 141 ntBASIC1.59□□□□□ -2.15
RETP07949 RNU6-1038P-201ENST00000516516 104 ntBASIC1.59□□□□□ -2.15
RETP07949 AL118558.2-201ENST00000556294 238 ntBASIC1.59□□□□□ -2.15
RETP07949 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.59□□□□□ -2.15
RETP07949 AC092747.3-201ENST00000603769 301 ntBASIC1.59□□□□□ -2.15
RETP07949 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.59□□□□□ -2.15
RETP07949 AC103705.1-201ENST00000619013 241 ntBASIC1.59□□□□□ -2.15
RETP07949 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.58□□□□□ -2.16
RETP07949 OR4G1P-203ENST00000641984 1631 ntBASIC1.58□□□□□ -2.16
RETP07949 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
RETP07949 Y_RNA.231-201ENST00000364358 102 ntBASIC1.58□□□□□ -2.16
RETP07949 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
RETP07949 RNU4-12P-201ENST00000365233 139 ntBASIC1.58□□□□□ -2.16
RETP07949 Y_RNA.450-201ENST00000384198 113 ntBASIC1.58□□□□□ -2.16
RETP07949 SNORA8-201ENST00000384574 139 ntBASIC1.58□□□□□ -2.16
RETP07949 RNU6-192P-201ENST00000391253 100 ntBASIC1.58□□□□□ -2.16
RETP07949 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RETP07949 AL591043.1-201ENST00000432461 424 ntBASIC1.58□□□□□ -2.16
RETP07949 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.58□□□□□ -2.16
RETP07949 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.58□□□□□ -2.16
RETP07949 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.58□□□□□ -2.16
RETP07949 Y_RNA.654-201ENST00000497848 106 ntBASIC1.58□□□□□ -2.16
RETP07949 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.58□□□□□ -2.16
RETP07949 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.58□□□□□ -2.16
RETP07949 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.58□□□□□ -2.16
RETP07949 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.58□□□□□ -2.16
RETP07949 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.58□□□□□ -2.16
RETP07949 MTND1P35-201ENST00000526739 508 ntBASIC1.58□□□□□ -2.16
RETP07949 AP000763.2-201ENST00000540641 163 ntBASIC1.58□□□□□ -2.16
RETP07949 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.58□□□□□ -2.16
RETP07949 AC015720.1-201ENST00000565251 277 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms