Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-1301P-201ENST00000362724 104 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 RNA5SP68-201ENST00000363885 119 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 RNU6-1286P-201ENST00000383871 107 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 Y_RNA.439-201ENST00000384119 94 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 SNORA29-201ENST00000384183 140 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 RNU6-17P-201ENST00000384245 107 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 RNU6-198P-201ENST00000384258 104 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 RNU6-301P-201ENST00000384277 107 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 RNU6-318P-201ENST00000384283 103 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 RNU6-18P-201ENST00000384527 107 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 MIR544A-201ENST00000384855 91 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 AL512633.1-201ENST00000399931 655 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 RNU2-14P-201ENST00000411053 191 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 AC074117.2-201ENST00000417130 397 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DOAP06340 AC087477.1-201ENST00000465747 340 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 AP000870.1-201ENST00000472927 406 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DOAP06340 SNORA31.23-201ENST00000517219 133 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 AC093023.1-201ENST00000547375 507 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 AC006199.1-201ENST00000548728 219 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 NACAP3-201ENST00000552100 481 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 UBL5P4-201ENST00000562584 236 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 MIR4659A-201ENST00000580269 81 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 MIR4435-1-201ENST00000582552 80 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 MIR376A1-201ENST00000616574 68 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 AC243829.7-201ENST00000633081 225 ntBASIC3.16□□□□□ -1.9
HLA-DOAP06340 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DOAP06340 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DOAP06340 AC110491.1-201ENST00000562191 2010 ntBASIC3.15□□□□□ -1.9
HLA-DOAP06340 AC007256.1-201ENST00000392253 2765 ntBASIC3.15□□□□□ -1.9
HLA-DOAP06340 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.9
HLA-DOAP06340 RNA5SP126-201ENST00000365092 109 ntBASIC3.15□□□□□ -1.91
HLA-DOAP06340 RNU6-338P-201ENST00000383888 105 ntBASIC3.15□□□□□ -1.91
HLA-DOAP06340 RNY3P4-201ENST00000384428 101 ntBASIC3.15□□□□□ -1.91
HLA-DOAP06340 Y_RNA.541-201ENST00000384640 113 ntBASIC3.15□□□□□ -1.91
HLA-DOAP06340 Y_RNA.602-201ENST00000410535 92 ntBASIC3.15□□□□□ -1.91
HLA-DOAP06340 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DOAP06340 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DOAP06340 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DOAP06340 RNU6-1012P-201ENST00000516606 109 ntBASIC3.15□□□□□ -1.91
HLA-DOAP06340 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DOAP06340 AC141273.2-201ENST00000618989 130 ntBASIC3.15□□□□□ -1.91
HLA-DOAP06340 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DOAP06340 AL450472.1-202ENST00000637286 180 ntBASIC3.15□□□□□ -1.91
HLA-DOAP06340 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOAP06340 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DOAP06340 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOAP06340 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOAP06340 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOAP06340 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOAP06340 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOAP06340 Y_RNA.504-201ENST00000384481 104 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOAP06340 AL133475.1-201ENST00000404414 305 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 RNU2-49P-201ENST00000410666 184 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 EEF1B2P7-201ENST00000451177 676 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 AL139109.1-201ENST00000455491 297 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 RPS3P1-201ENST00000456781 192 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 SCARNA24.2-201ENST00000516968 130 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 CR383656.8-201ENST00000549046 145 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 MIR4635-201ENST00000583759 79 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 MIR3199-2-201ENST00000636243 86 ntBASIC3.14□□□□□ -1.91
HLA-DOAP06340 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DOAP06340 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DOAP06340 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DOAP06340 ZNF826P-207ENST00000622273 1910 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 AC004944.1-201ENST00000517807 3059 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DOAP06340 RNU6-879P-201ENST00000364328 108 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 MIR549A-201ENST00000385268 96 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 RNA5SP213-201ENST00000391031 106 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 RNU6-1140P-201ENST00000410517 106 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 AC139712.2-201ENST00000424302 339 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 EIF1P2-201ENST00000428233 350 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 MTND5P15-201ENST00000434246 349 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 RPS29P6-201ENST00000438196 145 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 AL513328.1-201ENST00000446460 224 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DOAP06340 AC006026.2-201ENST00000457376 180 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 AL031183.1-201ENST00000457667 207 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 snoU13.6-201ENST00000458785 104 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 AP001025.1-201ENST00000486139 332 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DOAP06340 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DOAP06340 RNU6-138P-201ENST00000515952 107 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 RNA5SP282-201ENST00000516355 108 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 RNA5SP148-201ENST00000516527 94 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 ACA59.2-201ENST00000517061 156 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DOAP06340 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DOAP06340 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 U6.104-201ENST00000637979 90 ntBASIC3.13□□□□□ -1.91
HLA-DOAP06340 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DOAP06340 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DOAP06340 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DOAP06340 AL391987.6-201ENST00000305671 199 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms