Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.28□□□□□ -2.2
CD74P04233 AC103591.3-201ENST00000608684 209 ntBASIC1.28□□□□□ -2.2
CD74P04233 AC064836.2-201ENST00000609491 462 ntBASIC1.28□□□□□ -2.2
CD74P04233 AL590240.4-201ENST00000616908 390 ntBASIC1.28□□□□□ -2.2
CD74P04233 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CD74P04233 AC092268.1-201ENST00000342691 405 ntBASIC1.27□□□□□ -2.21
CD74P04233 MIR424-201ENST00000362227 98 ntBASIC1.27□□□□□ -2.21
CD74P04233 RNU6-1085P-201ENST00000363576 107 ntBASIC1.27□□□□□ -2.21
CD74P04233 RNU6-1322P-201ENST00000364309 107 ntBASIC1.27□□□□□ -2.21
CD74P04233 MTCO3P40-201ENST00000392516 676 ntBASIC1.27□□□□□ -2.21
CD74P04233 CALM2P3-201ENST00000400429 449 ntBASIC1.27□□□□□ -2.21
CD74P04233 MTCYBP2-201ENST00000407745 171 ntBASIC1.27□□□□□ -2.21
CD74P04233 MIR1304-201ENST00000408243 91 ntBASIC1.27□□□□□ -2.21
CD74P04233 RPL23AP95-201ENST00000426806 265 ntBASIC1.27□□□□□ -2.21
CD74P04233 TIMM9P3-201ENST00000428659 274 ntBASIC1.27□□□□□ -2.21
CD74P04233 MTND3P9-201ENST00000429526 346 ntBASIC1.27□□□□□ -2.21
CD74P04233 HMGB1P18-201ENST00000438801 619 ntBASIC1.27□□□□□ -2.21
CD74P04233 AL357134.1-201ENST00000445848 426 ntBASIC1.27□□□□□ -2.21
CD74P04233 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
CD74P04233 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.27□□□□□ -2.21
CD74P04233 MTND3P16-201ENST00000452205 344 ntBASIC1.27□□□□□ -2.21
CD74P04233 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.27□□□□□ -2.21
CD74P04233 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.27□□□□□ -2.21
CD74P04233 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
CD74P04233 RNU6-261P-201ENST00000459506 102 ntBASIC1.27□□□□□ -2.21
CD74P04233 AC083798.1-201ENST00000472671 131 ntBASIC1.27□□□□□ -2.21
CD74P04233 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.27□□□□□ -2.21
CD74P04233 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.27□□□□□ -2.21
CD74P04233 RPL23AP63-201ENST00000498752 471 ntBASIC1.27□□□□□ -2.21
CD74P04233 AC008628.2-201ENST00000502605 298 ntBASIC1.27□□□□□ -2.21
CD74P04233 AC107401.1-201ENST00000503426 685 ntBASIC1.27□□□□□ -2.21
CD74P04233 Y_RNA.675-201ENST00000516389 149 ntBASIC1.27□□□□□ -2.21
CD74P04233 RNU6-612P-201ENST00000516909 102 ntBASIC1.27□□□□□ -2.21
CD74P04233 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.27□□□□□ -2.21
CD74P04233 AP005597.4-201ENST00000526762 229 ntBASIC1.27□□□□□ -2.21
CD74P04233 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
CD74P04233 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.27□□□□□ -2.21
CD74P04233 Z98751.3-201ENST00000604447 521 ntBASIC1.27□□□□□ -2.21
CD74P04233 AC092807.2-201ENST00000609367 243 ntBASIC1.27□□□□□ -2.21
CD74P04233 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.27□□□□□ -2.21
CD74P04233 AC124864.2-201ENST00000624736 186 ntBASIC1.27□□□□□ -2.21
CD74P04233 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CD74P04233 AC009541.1-201ENST00000438279 2662 ntBASIC1.27□□□□□ -2.21
CD74P04233 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CD74P04233 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
CD74P04233 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CD74P04233 U3.9-201ENST00000363823 204 ntBASIC1.26□□□□□ -2.21
CD74P04233 SNORD114-6-201ENST00000364393 72 ntBASIC1.26□□□□□ -2.21
CD74P04233 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
CD74P04233 RNU6-780P-201ENST00000391030 104 ntBASIC1.26□□□□□ -2.21
CD74P04233 MIR208B-201ENST00000401172 77 ntBASIC1.26□□□□□ -2.21
CD74P04233 RNA5SP201-201ENST00000410316 124 ntBASIC1.26□□□□□ -2.21
CD74P04233 RNU2-41P-201ENST00000410991 178 ntBASIC1.26□□□□□ -2.21
CD74P04233 AP000275.1-201ENST00000411943 390 ntBASIC1.26□□□□□ -2.21
CD74P04233 MTCO3P41-201ENST00000414801 328 ntBASIC1.26□□□□□ -2.21
CD74P04233 SDAD1P3-201ENST00000427380 333 ntBASIC1.26□□□□□ -2.21
CD74P04233 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.26□□□□□ -2.21
CD74P04233 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.26□□□□□ -2.21
CD74P04233 MTCO2P3-201ENST00000442543 421 ntBASIC1.26□□□□□ -2.21
CD74P04233 SNRPEP8-201ENST00000442866 260 ntBASIC1.26□□□□□ -2.21
CD74P04233 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.26□□□□□ -2.21
CD74P04233 MTND1P29-201ENST00000448112 647 ntBASIC1.26□□□□□ -2.21
CD74P04233 snoU13.6-201ENST00000458785 104 ntBASIC1.26□□□□□ -2.21
CD74P04233 RNU6-1037P-201ENST00000459571 107 ntBASIC1.26□□□□□ -2.21
CD74P04233 AC114801.2-201ENST00000503825 781 ntBASIC1.26□□□□□ -2.21
CD74P04233 ATP5EP1-201ENST00000510257 156 ntBASIC1.26□□□□□ -2.21
CD74P04233 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
CD74P04233 Y_RNA.704-201ENST00000516851 102 ntBASIC1.26□□□□□ -2.21
CD74P04233 AC087854.1-201ENST00000519706 414 ntBASIC1.26□□□□□ -2.21
CD74P04233 AL512360.1-201ENST00000555346 234 ntBASIC1.26□□□□□ -2.21
CD74P04233 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.26□□□□□ -2.21
CD74P04233 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.26□□□□□ -2.21
CD74P04233 AL356157.2-201ENST00000605122 111 ntBASIC1.26□□□□□ -2.21
CD74P04233 BX248123.2-201ENST00000606318 124 ntBASIC1.26□□□□□ -2.21
CD74P04233 MIR502-201ENST00000606349 86 ntBASIC1.26□□□□□ -2.21
CD74P04233 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.26□□□□□ -2.21
CD74P04233 PCGEM1.1-201ENST00000613431 131 ntBASIC1.26□□□□□ -2.21
CD74P04233 AC103705.1-201ENST00000619013 241 ntBASIC1.26□□□□□ -2.21
CD74P04233 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.26□□□□□ -2.21
CD74P04233 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.26□□□□□ -2.21
CD74P04233 SNORA43.4-201ENST00000629559 138 ntBASIC1.26□□□□□ -2.21
CD74P04233 AL450472.1-202ENST00000637286 180 ntBASIC1.26□□□□□ -2.21
CD74P04233 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
CD74P04233 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CD74P04233 MTND4P23-201ENST00000447723 1363 ntBASIC1.25□□□□□ -2.21
CD74P04233 AC006026.1-201ENST00000444025 1803 ntBASIC1.25□□□□□ -2.21
CD74P04233 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CD74P04233 Y_RNA.67-201ENST00000362870 100 ntBASIC1.25□□□□□ -2.21
CD74P04233 RNA5SP493-201ENST00000364115 91 ntBASIC1.25□□□□□ -2.21
CD74P04233 RNU6-1317P-201ENST00000364582 104 ntBASIC1.25□□□□□ -2.21
CD74P04233 RNU6-438P-201ENST00000365561 103 ntBASIC1.25□□□□□ -2.21
CD74P04233 RNU6-160P-201ENST00000384591 107 ntBASIC1.25□□□□□ -2.21
CD74P04233 Y_RNA.559-201ENST00000384686 107 ntBASIC1.25□□□□□ -2.21
CD74P04233 RNA5SP213-201ENST00000391031 106 ntBASIC1.25□□□□□ -2.21
CD74P04233 MTCO3P46-201ENST00000425787 232 ntBASIC1.25□□□□□ -2.21
CD74P04233 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.25□□□□□ -2.21
CD74P04233 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.25□□□□□ -2.21
CD74P04233 MRPS10P2-201ENST00000431226 381 ntBASIC1.25□□□□□ -2.21
CD74P04233 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.25□□□□□ -2.21
CD74P04233 RNU7-14P-201ENST00000459331 62 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms