Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FAM204CP-201ENST00000424489 642 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.48□□□□□ -2.49
APOBP04114 AC116655.1-201ENST00000508324 901 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC093259.1-201ENST00000509755 300 ntBASIC-0.48□□□□□ -2.49
APOBP04114 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.48□□□□□ -2.49
APOBP04114 AC107952.2-201ENST00000606048 486 ntBASIC-0.48□□□□□ -2.49
APOBP04114 RNU6-24P-201ENST00000384440 107 ntBASIC-0.49□□□□□ -2.49
APOBP04114 MTCO1P21-201ENST00000416634 589 ntBASIC-0.49□□□□□ -2.49
APOBP04114 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.49□□□□□ -2.49
APOBP04114 AC109327.2-201ENST00000448339 378 ntBASIC-0.49□□□□□ -2.49
APOBP04114 RNU6-947P-201ENST00000516264 106 ntBASIC-0.49□□□□□ -2.49
APOBP04114 AC023632.1-201ENST00000518463 375 ntBASIC-0.49□□□□□ -2.49
APOBP04114 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.49□□□□□ -2.49
APOBP04114 C1DP5-201ENST00000525775 383 ntBASIC-0.49□□□□□ -2.49
APOBP04114 AC011979.2-201ENST00000527568 352 ntBASIC-0.49□□□□□ -2.49
APOBP04114 AC018630.3-201ENST00000542637 96 ntBASIC-0.49□□□□□ -2.49
APOBP04114 MIR1-1-201ENST00000362147 71 ntBASIC-0.49□□□□□ -2.49
APOBP04114 RNU2-3P-201ENST00000410144 191 ntBASIC-0.49□□□□□ -2.49
APOBP04114 MTCYBP10-201ENST00000424905 650 ntBASIC-0.49□□□□□ -2.49
APOBP04114 AC002486.1-201ENST00000435098 391 ntBASIC-0.49□□□□□ -2.49
APOBP04114 RNU6-333P-201ENST00000459117 107 ntBASIC-0.49□□□□□ -2.49
APOBP04114 SNORD60.2-201ENST00000516883 86 ntBASIC-0.49□□□□□ -2.49
APOBP04114 AL391001.1-201ENST00000602747 715 ntBASIC-0.49□□□□□ -2.49
APOBP04114 uc_338.28-201ENST00000612082 187 ntBASIC-0.49□□□□□ -2.49
APOBP04114 AL356596.1-201ENST00000624230 379 ntBASIC-0.49□□□□□ -2.49
APOBP04114 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.49□□□□□ -2.49
APOBP04114 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.49□□□□□ -2.49
APOBP04114 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.49□□□□□ -2.49
APOBP04114 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.5□□□□□ -2.49
APOBP04114 RPL36P19-201ENST00000430744 301 ntBASIC-0.5□□□□□ -2.49
APOBP04114 MTCO3P29-201ENST00000432119 779 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.5□□□□□ -2.49
APOBP04114 RN7SKP19-201ENST00000516016 252 ntBASIC-0.5□□□□□ -2.49
APOBP04114 RNU1-117P-201ENST00000517041 158 ntBASIC-0.5□□□□□ -2.49
APOBP04114 ACA59.2-201ENST00000517061 156 ntBASIC-0.5□□□□□ -2.49
APOBP04114 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.5□□□□□ -2.49
APOBP04114 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.5□□□□□ -2.49
APOBP04114 AC068205.3-201ENST00000636385 468 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AL357139.1-201ENST00000407792 426 ntBASIC-0.5□□□□□ -2.49
APOBP04114 RNA5SP163-201ENST00000410304 99 ntBASIC-0.5□□□□□ -2.49
APOBP04114 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.5□□□□□ -2.49
APOBP04114 AC104629.2-201ENST00000468627 598 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AC027419.1-201ENST00000522976 328 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.5□□□□□ -2.49
APOBP04114 AC021231.3-201ENST00000558497 370 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.5□□□□□ -2.49
APOBP04114 MIR1246-201ENST00000636535 73 ntBASIC-0.5□□□□□ -2.49
APOBP04114 SUGT1P1-201ENST00000379514 476 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AC022868.1-201ENST00000517767 391 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AC079598.5-201ENST00000547460 117 ntBASIC-0.5□□□□□ -2.49
APOBP04114 MIR548AO-201ENST00000579992 96 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AC098483.2-201ENST00000603158 454 ntBASIC-0.5□□□□□ -2.49
APOBP04114 ENSAP3-201ENST00000312710 333 ntBASIC-0.5□□□□□ -2.49
APOBP04114 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
APOBP04114 AL136310.1-201ENST00000404926 654 ntBASIC-0.5□□□□□ -2.49
APOBP04114 ARL5AP1-201ENST00000418991 388 ntBASIC-0.5□□□□□ -2.49
APOBP04114 MTCO1P19-201ENST00000443487 500 ntBASIC-0.5□□□□□ -2.49
APOBP04114 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.5□□□□□ -2.49
APOBP04114 AC245047.8-201ENST00000456455 284 ntBASIC-0.5□□□□□ -2.49
APOBP04114 RNU6-158P-201ENST00000517104 100 ntBASIC-0.5□□□□□ -2.49
APOBP04114 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.5□□□□□ -2.49
APOBP04114 AP005212.4-201ENST00000614206 710 ntBASIC-0.5□□□□□ -2.49
APOBP04114 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AC092685.1-201ENST00000447960 1243 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
APOBP04114 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.51□□□□□ -2.49
APOBP04114 RNU6-27P-201ENST00000516146 107 ntBASIC-0.51□□□□□ -2.49
APOBP04114 RNA5SP437-201ENST00000517249 129 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AC093519.1-201ENST00000566109 298 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AC138207.3-201ENST00000585289 166 ntBASIC-0.51□□□□□ -2.49
APOBP04114 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
APOBP04114 RNU6-743P-201ENST00000364151 106 ntBASIC-0.51□□□□□ -2.49
APOBP04114 MIR196A1-201ENST00000388006 70 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AL121978.1-201ENST00000402778 359 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.51□□□□□ -2.49
APOBP04114 OR8K2P-201ENST00000524645 927 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.51□□□□□ -2.49
APOBP04114 AC104695.3-201ENST00000604052 296 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AC004805.2-201ENST00000605382 482 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AL391099.1-201ENST00000624635 187 ntBASIC-0.51□□□□□ -2.49
APOBP04114 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.51□□□□□ -2.49
APOBP04114 SNORA8.2-201ENST00000384372 139 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.51□□□□□ -2.49
APOBP04114 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.51□□□□□ -2.49
APOBP04114 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
APOBP04114 AF235103.2-201ENST00000525753 346 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.51□□□□□ -2.49
APOBP04114 MIR4263-201ENST00000584745 83 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AC107075.1-201ENST00000613695 314 ntBASIC-0.51□□□□□ -2.49
APOBP04114 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.51□□□□□ -2.49
APOBP04114 AL109659.3-201ENST00000624985 950 ntBASIC-0.51□□□□□ -2.49
APOBP04114 RNA5SP482-201ENST00000391269 118 ntBASIC-0.52□□□□□ -2.49
APOBP04114 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.52□□□□□ -2.49
APOBP04114 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
APOBP04114 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.52□□□□□ -2.49
APOBP04114 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.52□□□□□ -2.49
APOBP04114 RBM11P1-201ENST00000604951 799 ntBASIC-0.52□□□□□ -2.49
APOBP04114 AC080188.3-201ENST00000624842 748 ntBASIC-0.52□□□□□ -2.49
APOBP04114 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms