Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 MTND1P14-201ENST00000427400 950 ntBASIC2.23□□□□□ -2.05
RAF1P04049 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.23□□□□□ -2.05
RAF1P04049 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.23□□□□□ -2.05
RAF1P04049 AL353705.4-201ENST00000449661 238 ntBASIC2.23□□□□□ -2.05
RAF1P04049 SNRPGP7-201ENST00000469016 106 ntBASIC2.23□□□□□ -2.05
RAF1P04049 AC093303.1-201ENST00000514549 295 ntBASIC2.23□□□□□ -2.05
RAF1P04049 RNU6-120P-201ENST00000516077 103 ntBASIC2.23□□□□□ -2.05
RAF1P04049 RNU2-53P-201ENST00000516257 147 ntBASIC2.23□□□□□ -2.05
RAF1P04049 SCARNA16.2-201ENST00000516520 172 ntBASIC2.23□□□□□ -2.05
RAF1P04049 RNU6-1153P-201ENST00000516760 105 ntBASIC2.23□□□□□ -2.05
RAF1P04049 Y_RNA.701-201ENST00000516812 110 ntBASIC2.23□□□□□ -2.05
RAF1P04049 IGLV3-17-201ENST00000519099 244 ntBASIC2.23□□□□□ -2.05
RAF1P04049 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RAF1P04049 AC121758.2-201ENST00000553271 193 ntBASIC2.23□□□□□ -2.05
RAF1P04049 MIR4273-201ENST00000582824 84 ntBASIC2.23□□□□□ -2.05
RAF1P04049 AC044792.1-201ENST00000593294 196 ntBASIC2.23□□□□□ -2.05
RAF1P04049 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.23□□□□□ -2.05
RAF1P04049 RPL30P11-203ENST00000598995 310 ntBASIC2.23□□□□□ -2.05
RAF1P04049 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
RAF1P04049 AL159153.1-201ENST00000619688 317 ntBASIC2.23□□□□□ -2.05
RAF1P04049 MIR5739-201ENST00000619803 80 ntBASIC2.23□□□□□ -2.05
RAF1P04049 MIR203B-201ENST00000636080 86 ntBASIC2.23□□□□□ -2.05
RAF1P04049 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RAF1P04049 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.23□□□□□ -2.05
RAF1P04049 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RAF1P04049 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RAF1P04049 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RAF1P04049 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RAF1P04049 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
RAF1P04049 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
RAF1P04049 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RAF1P04049 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RAF1P04049 RNU6-1285P-201ENST00000363480 105 ntBASIC2.22□□□□□ -2.05
RAF1P04049 RNA5SP456-201ENST00000364002 114 ntBASIC2.22□□□□□ -2.05
RAF1P04049 Y_RNA.533-201ENST00000384596 114 ntBASIC2.22□□□□□ -2.05
RAF1P04049 MIR524-201ENST00000385242 87 ntBASIC2.22□□□□□ -2.05
RAF1P04049 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RAF1P04049 SNORA75.6-201ENST00000391318 127 ntBASIC2.22□□□□□ -2.05
RAF1P04049 RNU2-23P-201ENST00000410545 195 ntBASIC2.22□□□□□ -2.05
RAF1P04049 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.22□□□□□ -2.05
RAF1P04049 AC243428.1-201ENST00000421099 264 ntBASIC2.22□□□□□ -2.05
RAF1P04049 EIF4EP2-201ENST00000422816 654 ntBASIC2.22□□□□□ -2.05
RAF1P04049 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.22□□□□□ -2.05
RAF1P04049 AC027575.1-201ENST00000481064 460 ntBASIC2.22□□□□□ -2.05
RAF1P04049 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.22□□□□□ -2.05
RAF1P04049 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.22□□□□□ -2.05
RAF1P04049 AC109329.1-201ENST00000518744 317 ntBASIC2.22□□□□□ -2.05
RAF1P04049 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.22□□□□□ -2.05
RAF1P04049 CBX3P8-201ENST00000532412 525 ntBASIC2.22□□□□□ -2.05
RAF1P04049 AC093249.1-201ENST00000567049 203 ntBASIC2.22□□□□□ -2.05
RAF1P04049 MIR5696-201ENST00000578474 85 ntBASIC2.22□□□□□ -2.05
RAF1P04049 AL356157.2-201ENST00000605122 111 ntBASIC2.22□□□□□ -2.05
RAF1P04049 AC080078.3-201ENST00000605407 463 ntBASIC2.22□□□□□ -2.05
RAF1P04049 AC009318.2-201ENST00000610917 651 ntBASIC2.22□□□□□ -2.05
RAF1P04049 AC007792.1-201ENST00000623023 402 ntBASIC2.22□□□□□ -2.05
RAF1P04049 SNORA43.4-201ENST00000629559 138 ntBASIC2.22□□□□□ -2.05
RAF1P04049 MTND5P9-201ENST00000503854 1755 ntBASIC2.22□□□□□ -2.05
RAF1P04049 AC002543.1-201ENST00000299783 1954 ntBASIC2.21□□□□□ -2.05
RAF1P04049 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RAF1P04049 Y_RNA.40-201ENST00000362645 93 ntBASIC2.21□□□□□ -2.06
RAF1P04049 Y_RNA.146-201ENST00000363549 102 ntBASIC2.21□□□□□ -2.06
RAF1P04049 RNU6-1141P-201ENST00000364520 107 ntBASIC2.21□□□□□ -2.06
RAF1P04049 U3.13-201ENST00000364804 214 ntBASIC2.21□□□□□ -2.06
RAF1P04049 RNU6-1032P-201ENST00000384100 107 ntBASIC2.21□□□□□ -2.06
RAF1P04049 MIR27B-201ENST00000385129 97 ntBASIC2.21□□□□□ -2.06
RAF1P04049 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.21□□□□□ -2.06
RAF1P04049 AC009963.1-201ENST00000417265 157 ntBASIC2.21□□□□□ -2.06
RAF1P04049 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.21□□□□□ -2.06
RAF1P04049 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.21□□□□□ -2.06
RAF1P04049 AC007677.1-201ENST00000445757 515 ntBASIC2.21□□□□□ -2.06
RAF1P04049 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RAF1P04049 snoU13.23-201ENST00000458863 104 ntBASIC2.21□□□□□ -2.06
RAF1P04049 AC022447.4-201ENST00000504053 364 ntBASIC2.21□□□□□ -2.06
RAF1P04049 HMGB3P3-201ENST00000510526 400 ntBASIC2.21□□□□□ -2.06
RAF1P04049 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.21□□□□□ -2.06
RAF1P04049 MRPS36P4-201ENST00000534436 298 ntBASIC2.21□□□□□ -2.06
RAF1P04049 DEFB122-202ENST00000569013 197 ntBASIC2.21□□□□□ -2.06
RAF1P04049 MIR4648-201ENST00000580107 72 ntBASIC2.21□□□□□ -2.06
RAF1P04049 AL713866.2-201ENST00000603579 219 ntBASIC2.21□□□□□ -2.06
RAF1P04049 AL355297.2-201ENST00000604792 129 ntBASIC2.21□□□□□ -2.06
RAF1P04049 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.21□□□□□ -2.06
RAF1P04049 AL450472.1-202ENST00000637286 180 ntBASIC2.21□□□□□ -2.06
RAF1P04049 MTND5P10-201ENST00000603719 1809 ntBASIC2.21□□□□□ -2.06
RAF1P04049 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.2□□□□□ -2.06
RAF1P04049 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
RAF1P04049 RNA5SP289-201ENST00000362332 137 ntBASIC2.2□□□□□ -2.06
RAF1P04049 RNU6-655P-201ENST00000362858 107 ntBASIC2.2□□□□□ -2.06
RAF1P04049 Y_RNA.138-201ENST00000363462 102 ntBASIC2.2□□□□□ -2.06
RAF1P04049 SNORD42.2-201ENST00000365570 69 ntBASIC2.2□□□□□ -2.06
RAF1P04049 SNORA41-201ENST00000384675 132 ntBASIC2.2□□□□□ -2.06
RAF1P04049 RN7SKP61-201ENST00000410642 295 ntBASIC2.2□□□□□ -2.06
RAF1P04049 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.2□□□□□ -2.06
RAF1P04049 AL356320.1-201ENST00000429616 163 ntBASIC2.2□□□□□ -2.06
RAF1P04049 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.2□□□□□ -2.06
RAF1P04049 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.2□□□□□ -2.06
RAF1P04049 CYP2C59P-201ENST00000457790 269 ntBASIC2.2□□□□□ -2.06
RAF1P04049 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.2□□□□□ -2.06
RAF1P04049 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.2□□□□□ -2.06
RAF1P04049 RNU6-1170P-201ENST00000515974 106 ntBASIC2.2□□□□□ -2.06
RAF1P04049 RNA5SP320-201ENST00000516263 124 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms