Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL139022.2-201ENST00000606934 443 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 AP002360.4-201ENST00000606980 481 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 AC097478.2-201ENST00000610572 514 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.45□□□□□ -2.34
COL1A1P02452 MIR340-201ENST00000362125 95 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 MIR578-201ENST00000384828 96 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 AL117342.1-201ENST00000404861 406 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 COX6CP10-201ENST00000416832 224 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 RPL22P18-201ENST00000417197 377 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.44□□□□□ -2.34
COL1A1P02452 AC114482.1-201ENST00000418010 247 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
COL1A1P02452 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.44□□□□□ -2.34
COL1A1P02452 GTF2IP13-201ENST00000438487 386 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.44□□□□□ -2.34
COL1A1P02452 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.44□□□□□ -2.34
COL1A1P02452 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.44□□□□□ -2.34
COL1A1P02452 snoU13.27-201ENST00000459278 104 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.44□□□□□ -2.34
COL1A1P02452 RNU6-123P-201ENST00000516163 102 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 RNA5SP437-201ENST00000517249 129 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 AC090142.3-201ENST00000519012 385 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.44□□□□□ -2.34
COL1A1P02452 AL590229.1-201ENST00000603497 542 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 AL034555.1-201ENST00000604816 211 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 MIR3976-201ENST00000606807 139 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 AC131159.1-201ENST00000621854 213 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 AC103706.2-201ENST00000638080 240 ntBASIC0.44□□□□□ -2.34
COL1A1P02452 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
COL1A1P02452 MIR409-201ENST00000362237 79 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 RNU6-78P-201ENST00000362897 107 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 SNORD56.2-201ENST00000363242 71 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 U3.8-201ENST00000363675 217 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 Y_RNA.170-201ENST00000363746 110 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 SNORA63D-201ENST00000364359 132 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 MIR548B-201ENST00000385247 97 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 RNU6-293P-201ENST00000411259 106 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.43□□□□□ -2.34
COL1A1P02452 AC078809.1-201ENST00000427601 140 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.43□□□□□ -2.34
COL1A1P02452 RPL22P17-201ENST00000438729 315 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 AC243964.1-201ENST00000441814 261 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 AC073910.1-201ENST00000445047 438 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.43□□□□□ -2.34
COL1A1P02452 ART2BP-201ENST00000453501 499 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 RNU7-14P-201ENST00000459331 62 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 SNORD124-201ENST00000459577 104 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.43□□□□□ -2.34
COL1A1P02452 RNU6-377P-201ENST00000515965 102 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.43□□□□□ -2.34
COL1A1P02452 MTND2P7-201ENST00000521337 640 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.43□□□□□ -2.34
COL1A1P02452 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.43□□□□□ -2.34
COL1A1P02452 MTATP6P15-201ENST00000527233 835 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 AC008751.2-201ENST00000597885 980 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 RPL17P51-201ENST00000605218 238 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.43□□□□□ -2.34
COL1A1P02452 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 AC012409.4-201ENST00000612923 249 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 AC006001.4-201ENST00000622243 395 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.43□□□□□ -2.34
COL1A1P02452 SNORD98-201ENST00000636377 67 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 U4.7-201ENST00000638126 106 ntBASIC0.43□□□□□ -2.34
COL1A1P02452 MTND4P16-201ENST00000466108 1367 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 SNORD31B-201ENST00000364977 69 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
COL1A1P02452 RNU6-1000P-201ENST00000391066 106 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 MTCYBP2-201ENST00000407745 171 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 RPL37P21-201ENST00000435890 276 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 AC244670.1-201ENST00000436879 112 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.42□□□□□ -2.34
COL1A1P02452 AC104692.1-201ENST00000472406 90 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 AC104982.1-201ENST00000478775 574 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 RPS23P5-201ENST00000495419 428 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 PDCD5P2-201ENST00000507570 312 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.42□□□□□ -2.34
COL1A1P02452 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.42□□□□□ -2.34
COL1A1P02452 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.42□□□□□ -2.34
COL1A1P02452 RNU1-86P-201ENST00000516108 154 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 RNU6-758P-201ENST00000516292 89 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 RNU5F-4P-201ENST00000516581 114 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 RNU1-107P-201ENST00000516617 154 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.42□□□□□ -2.34
COL1A1P02452 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.42□□□□□ -2.34
COL1A1P02452 AC068790.6-201ENST00000602558 258 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 AL158042.1-201ENST00000605338 460 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 AL451064.1-201ENST00000607718 471 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 AC108747.1-201ENST00000609508 535 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.42□□□□□ -2.34
COL1A1P02452 uc_338.22-201ENST00000622722 187 ntBASIC0.42□□□□□ -2.34
COL1A1P02452 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.42□□□□□ -2.34
COL1A1P02452 U3.9-201ENST00000363823 204 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 RNU6-1141P-201ENST00000364520 107 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 SNORA32.2-201ENST00000384049 122 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 RNU6-331P-201ENST00000384724 107 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 SNORA12.2-201ENST00000391040 156 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AL031577.2-201ENST00000404133 280 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 RNU2-39P-201ENST00000410604 198 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms