Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.22□□□□□ -2.44
TNFP01375 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
TNFP01375 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
TNFP01375 MTCO3P10-201ENST00000455912 772 ntBASIC-0.22□□□□□ -2.44
TNFP01375 AC022364.2-201ENST00000457963 554 ntBASIC-0.22□□□□□ -2.44
TNFP01375 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.22□□□□□ -2.44
TNFP01375 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.22□□□□□ -2.44
TNFP01375 MTND1P36-201ENST00000522384 936 ntBASIC-0.22□□□□□ -2.44
TNFP01375 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.22□□□□□ -2.44
TNFP01375 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
TNFP01375 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.22□□□□□ -2.44
TNFP01375 AC022523.2-201ENST00000561045 150 ntBASIC-0.22□□□□□ -2.44
TNFP01375 AC023827.1-201ENST00000569247 97 ntBASIC-0.22□□□□□ -2.44
TNFP01375 AL391903.3-201ENST00000612158 163 ntBASIC-0.22□□□□□ -2.44
TNFP01375 MIR8064-201ENST00000612863 90 ntBASIC-0.22□□□□□ -2.44
TNFP01375 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
TNFP01375 SNORD56.1-201ENST00000362913 68 ntBASIC-0.23□□□□□ -2.45
TNFP01375 RNA5SP128-201ENST00000365305 116 ntBASIC-0.23□□□□□ -2.45
TNFP01375 RNU6-929P-201ENST00000384429 107 ntBASIC-0.23□□□□□ -2.45
TNFP01375 RNU6-953P-201ENST00000459154 107 ntBASIC-0.23□□□□□ -2.45
TNFP01375 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.23□□□□□ -2.45
TNFP01375 AC104563.1-201ENST00000476147 376 ntBASIC-0.23□□□□□ -2.45
TNFP01375 RNU6-917P-201ENST00000516294 104 ntBASIC-0.23□□□□□ -2.45
TNFP01375 AC021231.3-201ENST00000558497 370 ntBASIC-0.23□□□□□ -2.45
TNFP01375 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.23□□□□□ -2.45
TNFP01375 MTND1P15-201ENST00000579262 949 ntBASIC-0.23□□□□□ -2.45
TNFP01375 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.23□□□□□ -2.45
TNFP01375 AL096861.1-201ENST00000610899 123 ntBASIC-0.23□□□□□ -2.45
TNFP01375 AC104073.3-201ENST00000610942 955 ntBASIC-0.23□□□□□ -2.45
TNFP01375 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.23□□□□□ -2.45
TNFP01375 MIR6759-201ENST00000638110 65 ntBASIC-0.23□□□□□ -2.45
TNFP01375 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.23□□□□□ -2.45
TNFP01375 AL390237.1-201ENST00000404226 1415 ntBASIC-0.23□□□□□ -2.45
TNFP01375 SNORD114-31-201ENST00000363219 75 ntBASIC-0.24□□□□□ -2.45
TNFP01375 SNORD31B-201ENST00000364977 69 ntBASIC-0.24□□□□□ -2.45
TNFP01375 RNU6-701P-201ENST00000384059 107 ntBASIC-0.24□□□□□ -2.45
TNFP01375 RNA5SP504-201ENST00000410676 117 ntBASIC-0.24□□□□□ -2.45
TNFP01375 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.24□□□□□ -2.45
TNFP01375 AC073261.1-201ENST00000429409 121 ntBASIC-0.24□□□□□ -2.45
TNFP01375 SEPT7P5-201ENST00000434048 306 ntBASIC-0.24□□□□□ -2.45
TNFP01375 AC007969.2-201ENST00000441891 191 ntBASIC-0.24□□□□□ -2.45
TNFP01375 AC006026.2-201ENST00000457376 180 ntBASIC-0.24□□□□□ -2.45
TNFP01375 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
TNFP01375 SNORA43.2-201ENST00000516652 128 ntBASIC-0.24□□□□□ -2.45
TNFP01375 RNU6-64P-201ENST00000517119 105 ntBASIC-0.24□□□□□ -2.45
TNFP01375 AP003049.1-201ENST00000529418 457 ntBASIC-0.24□□□□□ -2.45
TNFP01375 AP002001.1-203ENST00000534002 267 ntBASIC-0.24□□□□□ -2.45
TNFP01375 AC090049.2-201ENST00000550377 109 ntBASIC-0.24□□□□□ -2.45
TNFP01375 AC024060.1-201ENST00000607052 494 ntBASIC-0.24□□□□□ -2.45
TNFP01375 AC006157.1-201ENST00000611750 366 ntBASIC-0.24□□□□□ -2.45
TNFP01375 AL136317.1-201ENST00000612653 226 ntBASIC-0.24□□□□□ -2.45
TNFP01375 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
TNFP01375 RNU4-76P-201ENST00000364509 141 ntBASIC-0.25□□□□□ -2.45
TNFP01375 RNA5SP517-201ENST00000364724 117 ntBASIC-0.25□□□□□ -2.45
TNFP01375 RNU6-46P-201ENST00000383860 107 ntBASIC-0.25□□□□□ -2.45
TNFP01375 MIR19A-201ENST00000384878 82 ntBASIC-0.25□□□□□ -2.45
TNFP01375 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.25□□□□□ -2.45
TNFP01375 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.25□□□□□ -2.45
TNFP01375 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.25□□□□□ -2.45
TNFP01375 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.25□□□□□ -2.45
TNFP01375 MTND2P20-201ENST00000440805 661 ntBASIC-0.25□□□□□ -2.45
TNFP01375 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.25□□□□□ -2.45
TNFP01375 AL133217.1-201ENST00000450980 425 ntBASIC-0.25□□□□□ -2.45
TNFP01375 AC104136.1-201ENST00000512969 394 ntBASIC-0.25□□□□□ -2.45
TNFP01375 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.25□□□□□ -2.45
TNFP01375 MIR1273C-201ENST00000578669 77 ntBASIC-0.25□□□□□ -2.45
TNFP01375 MIR3146-201ENST00000580367 79 ntBASIC-0.25□□□□□ -2.45
TNFP01375 AC004223.2-201ENST00000590309 544 ntBASIC-0.25□□□□□ -2.45
TNFP01375 AC064872.1-201ENST00000604823 1072 ntBASIC-0.25□□□□□ -2.45
TNFP01375 RPL21P136-201ENST00000605378 396 ntBASIC-0.25□□□□□ -2.45
TNFP01375 AL357075.2-201ENST00000614906 189 ntBASIC-0.25□□□□□ -2.45
TNFP01375 AP000676.3-201ENST00000623299 569 ntBASIC-0.25□□□□□ -2.45
TNFP01375 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.25□□□□□ -2.45
TNFP01375 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.26□□□□□ -2.45
TNFP01375 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.26□□□□□ -2.45
TNFP01375 RNU6-395P-201ENST00000365662 106 ntBASIC-0.26□□□□□ -2.45
TNFP01375 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.26□□□□□ -2.45
TNFP01375 MIR145-201ENST00000384967 88 ntBASIC-0.26□□□□□ -2.45
TNFP01375 MIR214-201ENST00000385214 110 ntBASIC-0.26□□□□□ -2.45
TNFP01375 SNORD105-201ENST00000386910 85 ntBASIC-0.26□□□□□ -2.45
TNFP01375 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.26□□□□□ -2.45
TNFP01375 MTCO2P34-201ENST00000421994 607 ntBASIC-0.26□□□□□ -2.45
TNFP01375 AL353777.1-201ENST00000425552 326 ntBASIC-0.26□□□□□ -2.45
TNFP01375 TIMM9P3-201ENST00000428659 274 ntBASIC-0.26□□□□□ -2.45
TNFP01375 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.26□□□□□ -2.45
TNFP01375 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.26□□□□□ -2.45
TNFP01375 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.26□□□□□ -2.45
TNFP01375 MTCO1P19-201ENST00000443487 500 ntBASIC-0.26□□□□□ -2.45
TNFP01375 MRPL42P4-201ENST00000453267 443 ntBASIC-0.26□□□□□ -2.45
TNFP01375 RNU7-59P-201ENST00000459101 61 ntBASIC-0.26□□□□□ -2.45
TNFP01375 AC112206.3-201ENST00000514578 389 ntBASIC-0.26□□□□□ -2.45
TNFP01375 RNU6-914P-201ENST00000516749 109 ntBASIC-0.26□□□□□ -2.45
TNFP01375 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.26□□□□□ -2.45
TNFP01375 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.26□□□□□ -2.45
TNFP01375 AL034555.1-201ENST00000604816 211 ntBASIC-0.26□□□□□ -2.45
TNFP01375 RNU6-94P-201ENST00000607728 107 ntBASIC-0.26□□□□□ -2.45
TNFP01375 AC004832.4-201ENST00000608952 331 ntBASIC-0.26□□□□□ -2.45
TNFP01375 AL513423.1-201ENST00000621695 132 ntBASIC-0.26□□□□□ -2.45
TNFP01375 RNU6-833P-201ENST00000363486 107 ntBASIC-0.27□□□□□ -2.45
TNFP01375 SNORD115-24-201ENST00000363528 82 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms