Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.23□□□□□ -2.05
CLPTM1O96005 AC007375.1-201ENST00000554513 578 ntBASIC2.23□□□□□ -2.05
CLPTM1O96005 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.23□□□□□ -2.05
CLPTM1O96005 MIR5696-201ENST00000578474 85 ntBASIC2.23□□□□□ -2.05
CLPTM1O96005 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.23□□□□□ -2.05
CLPTM1O96005 AL159153.1-201ENST00000619688 317 ntBASIC2.23□□□□□ -2.05
CLPTM1O96005 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLPTM1O96005 AC007792.1-201ENST00000623023 402 ntBASIC2.23□□□□□ -2.05
CLPTM1O96005 AL450472.1-202ENST00000637286 180 ntBASIC2.23□□□□□ -2.05
CLPTM1O96005 ZNF299P-201ENST00000406845 1804 ntBASIC2.23□□□□□ -2.05
CLPTM1O96005 AC233981.2-201ENST00000611524 1614 ntBASIC2.23□□□□□ -2.05
CLPTM1O96005 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLPTM1O96005 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.23□□□□□ -2.05
CLPTM1O96005 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLPTM1O96005 RNY1P16-201ENST00000363063 111 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 RNU6-1285P-201ENST00000363480 105 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 Y_RNA.197-201ENST00000364004 102 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 SNORD114-30-201ENST00000364448 72 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 Y_RNA.445-201ENST00000384168 102 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 RNU4-52P-201ENST00000384209 138 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 RNU6-474P-201ENST00000384243 107 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 RNU6-1011P-201ENST00000384668 107 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 MIR186-201ENST00000384988 86 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CLPTM1O96005 RN7SKP61-201ENST00000410642 295 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 AL358453.1-201ENST00000422522 250 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.22□□□□□ -2.05
CLPTM1O96005 Z82188.1-201ENST00000436709 154 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 UBE2DNL-203ENST00000474922 222 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.22□□□□□ -2.05
CLPTM1O96005 AC016632.1-201ENST00000503994 196 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 AC023141.11-201ENST00000508864 202 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.22□□□□□ -2.05
CLPTM1O96005 RNU6-307P-201ENST00000516743 106 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 RNU6-699P-201ENST00000517081 110 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.22□□□□□ -2.05
CLPTM1O96005 CYCSP26-201ENST00000534107 320 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 AC079598.5-201ENST00000547460 117 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.22□□□□□ -2.05
CLPTM1O96005 SNORD53-201ENST00000579969 78 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 MIR3162-201ENST00000581818 82 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 MIR4672-201ENST00000583126 81 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 AC005899.2-201ENST00000584353 90 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.22□□□□□ -2.05
CLPTM1O96005 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.22□□□□□ -2.05
CLPTM1O96005 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CLPTM1O96005 MTND4P1-201ENST00000457501 1466 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLPTM1O96005 AC131280.1-202ENST00000624067 4211 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 Y_RNA.31-201ENST00000362574 102 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 RNA5SP68-201ENST00000363885 119 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 RNU6-595P-201ENST00000363944 107 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 Y_RNA.216-201ENST00000364205 93 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 RNU6-99P-201ENST00000364721 107 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 RNU6-1286P-201ENST00000383871 107 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 SNORA29-201ENST00000384183 140 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 Y_RNA.463-201ENST00000384271 102 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 RNU1-57P-201ENST00000384491 166 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 MIR218-1-201ENST00000384999 110 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 U3.40-201ENST00000408706 208 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.21□□□□□ -2.06
CLPTM1O96005 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.21□□□□□ -2.06
CLPTM1O96005 AL590135.1-201ENST00000422215 156 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 MRPS18CP6-201ENST00000423587 223 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AC019205.3-201ENST00000424573 156 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AC008267.5-201ENST00000424928 265 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.21□□□□□ -2.06
CLPTM1O96005 AC016700.2-201ENST00000446011 156 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AL353705.4-201ENST00000449661 238 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AL513124.1-201ENST00000450410 614 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.21□□□□□ -2.06
CLPTM1O96005 snoU13.6-201ENST00000458785 104 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AC068781.1-201ENST00000488231 618 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.21□□□□□ -2.06
CLPTM1O96005 AC015911.1-201ENST00000495111 156 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AC105758.1-201ENST00000506038 399 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 Y_RNA.661-201ENST00000516003 99 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.21□□□□□ -2.06
CLPTM1O96005 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.21□□□□□ -2.06
CLPTM1O96005 MIR4719-201ENST00000585233 84 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
CLPTM1O96005 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.21□□□□□ -2.06
CLPTM1O96005 AL078605.1-201ENST00000603529 500 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AL353621.2-201ENST00000605340 133 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.21□□□□□ -2.06
CLPTM1O96005 SNORD98-201ENST00000636377 67 ntBASIC2.21□□□□□ -2.06
CLPTM1O96005 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CLPTM1O96005 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLPTM1O96005 Y_RNA.5-201ENST00000362334 102 ntBASIC2.2□□□□□ -2.06
CLPTM1O96005 RNA5SP494-201ENST00000410653 129 ntBASIC2.2□□□□□ -2.06
CLPTM1O96005 EIF1AXP1-201ENST00000419267 435 ntBASIC2.2□□□□□ -2.06
CLPTM1O96005 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.2□□□□□ -2.06
CLPTM1O96005 AC097463.2-201ENST00000421074 142 ntBASIC2.2□□□□□ -2.06
CLPTM1O96005 AIMP1P2-201ENST00000425294 312 ntBASIC2.2□□□□□ -2.06
CLPTM1O96005 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.2□□□□□ -2.06
CLPTM1O96005 EEF1B2P7-201ENST00000451177 676 ntBASIC2.2□□□□□ -2.06
CLPTM1O96005 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.2□□□□□ -2.06
CLPTM1O96005 AL121594.1-201ENST00000475906 575 ntBASIC2.2□□□□□ -2.06
CLPTM1O96005 RPL17P19-201ENST00000489069 552 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms