Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 Y_RNA.638-201ENST00000459374 113 ntBASIC2.46□□□□□ -2.02
DDX58O95786 AC130509.1-201ENST00000464158 433 ntBASIC2.46□□□□□ -2.02
DDX58O95786 RNU6-358P-201ENST00000516564 75 ntBASIC2.46□□□□□ -2.02
DDX58O95786 AC078795.3-201ENST00000602913 472 ntBASIC2.46□□□□□ -2.02
DDX58O95786 AC025754.2-201ENST00000606491 432 ntBASIC2.46□□□□□ -2.02
DDX58O95786 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX58O95786 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
DDX58O95786 RNA5SP37-201ENST00000365420 130 ntBASIC2.45□□□□□ -2.02
DDX58O95786 SNORD116-11-201ENST00000383882 92 ntBASIC2.45□□□□□ -2.02
DDX58O95786 SNORA36A-201ENST00000384221 132 ntBASIC2.45□□□□□ -2.02
DDX58O95786 RNU6-95P-201ENST00000384697 107 ntBASIC2.45□□□□□ -2.02
DDX58O95786 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
DDX58O95786 SNORA46.1-201ENST00000391069 153 ntBASIC2.45□□□□□ -2.02
DDX58O95786 RNU6-1148P-201ENST00000410992 104 ntBASIC2.45□□□□□ -2.02
DDX58O95786 EIF1AXP1-201ENST00000419267 435 ntBASIC2.45□□□□□ -2.02
DDX58O95786 AL445685.2-201ENST00000422551 342 ntBASIC2.45□□□□□ -2.02
DDX58O95786 AL353572.1-201ENST00000442490 417 ntBASIC2.45□□□□□ -2.02
DDX58O95786 PRELID3BP1-201ENST00000457142 540 ntBASIC2.45□□□□□ -2.02
DDX58O95786 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.45□□□□□ -2.02
DDX58O95786 RNU6-864P-201ENST00000516256 108 ntBASIC2.45□□□□□ -2.02
DDX58O95786 SNORA31.25-201ENST00000517242 134 ntBASIC2.45□□□□□ -2.02
DDX58O95786 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.45□□□□□ -2.02
DDX58O95786 AC110588.1-201ENST00000559699 137 ntBASIC2.45□□□□□ -2.02
DDX58O95786 AC233702.2-202ENST00000562547 291 ntBASIC2.45□□□□□ -2.02
DDX58O95786 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.45□□□□□ -2.02
DDX58O95786 AC019193.3-201ENST00000609144 554 ntBASIC2.45□□□□□ -2.02
DDX58O95786 AC009248.2-201ENST00000619826 254 ntBASIC2.45□□□□□ -2.02
DDX58O95786 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
DDX58O95786 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
DDX58O95786 U3.9-201ENST00000363823 204 ntBASIC2.44□□□□□ -2.02
DDX58O95786 MIR29C-201ENST00000385231 88 ntBASIC2.44□□□□□ -2.02
DDX58O95786 RNU6-510P-201ENST00000391239 108 ntBASIC2.44□□□□□ -2.02
DDX58O95786 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.44□□□□□ -2.02
DDX58O95786 RPL23AP7-203ENST00000449021 469 ntBASIC2.44□□□□□ -2.02
DDX58O95786 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.44□□□□□ -2.02
DDX58O95786 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.44□□□□□ -2.02
DDX58O95786 RPS29P27-201ENST00000463711 170 ntBASIC2.44□□□□□ -2.02
DDX58O95786 AC132942.1-201ENST00000486753 483 ntBASIC2.44□□□□□ -2.02
DDX58O95786 AC108210.2-201ENST00000503681 201 ntBASIC2.44□□□□□ -2.02
DDX58O95786 PTP4A1P4-201ENST00000512479 322 ntBASIC2.44□□□□□ -2.02
DDX58O95786 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.44□□□□□ -2.02
DDX58O95786 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.44□□□□□ -2.02
DDX58O95786 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.44□□□□□ -2.02
DDX58O95786 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.44□□□□□ -2.02
DDX58O95786 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.44□□□□□ -2.02
DDX58O95786 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
DDX58O95786 AC011712.1-201ENST00000588959 234 ntBASIC2.44□□□□□ -2.02
DDX58O95786 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.44□□□□□ -2.02
DDX58O95786 MIR8076-201ENST00000611401 83 ntBASIC2.44□□□□□ -2.02
DDX58O95786 AL132822.1-201ENST00000617063 513 ntBASIC2.44□□□□□ -2.02
DDX58O95786 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.44□□□□□ -2.02
DDX58O95786 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.43□□□□□ -2.02
DDX58O95786 RNU6-26P-201ENST00000383985 107 ntBASIC2.43□□□□□ -2.02
DDX58O95786 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
DDX58O95786 SNORA26.9-201ENST00000391322 122 ntBASIC2.43□□□□□ -2.02
DDX58O95786 HMGN2P39-201ENST00000398005 273 ntBASIC2.43□□□□□ -2.02
DDX58O95786 MIR208B-201ENST00000401172 77 ntBASIC2.43□□□□□ -2.02
DDX58O95786 AL357139.1-201ENST00000407792 426 ntBASIC2.43□□□□□ -2.02
DDX58O95786 RPL30P16-201ENST00000419341 429 ntBASIC2.43□□□□□ -2.02
DDX58O95786 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.43□□□□□ -2.02
DDX58O95786 MTND1P11-201ENST00000456661 876 ntBASIC2.43□□□□□ -2.02
DDX58O95786 PPP1R2P5-201ENST00000457256 603 ntBASIC2.43□□□□□ -2.02
DDX58O95786 MIR449C-201ENST00000516047 92 ntBASIC2.43□□□□□ -2.02
DDX58O95786 PRELID2P1-201ENST00000552837 301 ntBASIC2.43□□□□□ -2.02
DDX58O95786 CYP4A27P-201ENST00000567218 190 ntBASIC2.43□□□□□ -2.02
DDX58O95786 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.43□□□□□ -2.02
DDX58O95786 CPDP1-201ENST00000579660 283 ntBASIC2.43□□□□□ -2.02
DDX58O95786 POLR3GP2-201ENST00000588366 668 ntBASIC2.43□□□□□ -2.02
DDX58O95786 AC060780.3-201ENST00000589464 80 ntBASIC2.43□□□□□ -2.02
DDX58O95786 AL078605.1-201ENST00000603529 500 ntBASIC2.43□□□□□ -2.02
DDX58O95786 SNRPGP19-201ENST00000603826 189 ntBASIC2.43□□□□□ -2.02
DDX58O95786 Z98751.3-201ENST00000604447 521 ntBASIC2.43□□□□□ -2.02
DDX58O95786 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.43□□□□□ -2.02
DDX58O95786 MIR1248-201ENST00000629190 106 ntBASIC2.43□□□□□ -2.02
DDX58O95786 SNORA43.4-201ENST00000629559 138 ntBASIC2.43□□□□□ -2.02
DDX58O95786 CASC19-280ENST00000642102 1351 ntBASIC2.43□□□□□ -2.02
DDX58O95786 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.43□□□□□ -2.02
DDX58O95786 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX58O95786 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
DDX58O95786 MIR517A-201ENST00000385001 87 ntBASIC2.42□□□□□ -2.02
DDX58O95786 RNU6-876P-201ENST00000391295 104 ntBASIC2.42□□□□□ -2.02
DDX58O95786 AL356776.1-201ENST00000406574 447 ntBASIC2.42□□□□□ -2.02
DDX58O95786 MTCYBP2-201ENST00000407745 171 ntBASIC2.42□□□□□ -2.02
DDX58O95786 RNU2-48P-201ENST00000410694 191 ntBASIC2.42□□□□□ -2.02
DDX58O95786 SRIP3-201ENST00000413200 219 ntBASIC2.42□□□□□ -2.02
DDX58O95786 AC007677.1-201ENST00000445757 515 ntBASIC2.42□□□□□ -2.02
DDX58O95786 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.42□□□□□ -2.02
DDX58O95786 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX58O95786 AC090255.1-201ENST00000495779 349 ntBASIC2.42□□□□□ -2.02
DDX58O95786 AC021146.2-201ENST00000504736 556 ntBASIC2.42□□□□□ -2.02
DDX58O95786 RNU6-991P-201ENST00000516168 107 ntBASIC2.42□□□□□ -2.02
DDX58O95786 RNU2-19P-201ENST00000517288 84 ntBASIC2.42□□□□□ -2.02
DDX58O95786 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX58O95786 AC011494.1-201ENST00000596454 237 ntBASIC2.42□□□□□ -2.02
DDX58O95786 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.42□□□□□ -2.02
DDX58O95786 AL133215.3-201ENST00000609801 448 ntBASIC2.42□□□□□ -2.02
DDX58O95786 MIR6845-201ENST00000613182 61 ntBASIC2.42□□□□□ -2.02
DDX58O95786 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.42□□□□□ -2.02
DDX58O95786 AC233981.2-201ENST00000611524 1614 ntBASIC2.42□□□□□ -2.02
DDX58O95786 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms