Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MTCYBP1-201ENST00000454315 1119 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AL162395.1-201ENST00000457882 422 ntBASIC0.91□□□□□ -2.26
VAPBO95292 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.91□□□□□ -2.26
VAPBO95292 AC008628.2-201ENST00000502605 298 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.91□□□□□ -2.26
VAPBO95292 ARL2BPP4-201ENST00000506854 471 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AC067942.3-201ENST00000512025 362 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AC108729.3-201ENST00000513484 108 ntBASIC0.91□□□□□ -2.26
VAPBO95292 RNA5SP384-201ENST00000516615 116 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AC090572.1-201ENST00000519251 160 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.91□□□□□ -2.26
VAPBO95292 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.91□□□□□ -2.26
VAPBO95292 AC103996.1-201ENST00000555468 102 ntBASIC0.91□□□□□ -2.26
VAPBO95292 MIR3664-201ENST00000579074 99 ntBASIC0.91□□□□□ -2.26
VAPBO95292 CTHRC1P1-201ENST00000605383 469 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AC016727.1-205ENST00000605437 569 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AC009994.1-201ENST00000606889 253 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AL391834.2-201ENST00000609982 546 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AC005520.5-201ENST00000613926 164 ntBASIC0.91□□□□□ -2.26
VAPBO95292 AL450472.1-202ENST00000637286 180 ntBASIC0.91□□□□□ -2.26
VAPBO95292 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
VAPBO95292 RNU6-1123P-201ENST00000362347 106 ntBASIC0.9□□□□□ -2.27
VAPBO95292 RNU6-545P-201ENST00000362681 104 ntBASIC0.9□□□□□ -2.27
VAPBO95292 RNU6-418P-201ENST00000384035 107 ntBASIC0.9□□□□□ -2.27
VAPBO95292 RNU6-434P-201ENST00000384376 107 ntBASIC0.9□□□□□ -2.27
VAPBO95292 RNU6-393P-201ENST00000384475 107 ntBASIC0.9□□□□□ -2.27
VAPBO95292 MIR454-201ENST00000390180 115 ntBASIC0.9□□□□□ -2.27
VAPBO95292 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.9□□□□□ -2.27
VAPBO95292 AC090960.1-201ENST00000421072 306 ntBASIC0.9□□□□□ -2.27
VAPBO95292 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.9□□□□□ -2.27
VAPBO95292 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.9□□□□□ -2.27
VAPBO95292 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.9□□□□□ -2.27
VAPBO95292 TAF9P1-201ENST00000445421 515 ntBASIC0.9□□□□□ -2.27
VAPBO95292 AL133217.1-201ENST00000450980 425 ntBASIC0.9□□□□□ -2.27
VAPBO95292 TAF9P2-201ENST00000454958 515 ntBASIC0.9□□□□□ -2.27
VAPBO95292 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.9□□□□□ -2.27
VAPBO95292 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.9□□□□□ -2.27
VAPBO95292 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
VAPBO95292 AC079382.1-201ENST00000493346 557 ntBASIC0.9□□□□□ -2.27
VAPBO95292 AC091435.1-201ENST00000505442 584 ntBASIC0.9□□□□□ -2.27
VAPBO95292 RNU2-46P-201ENST00000517038 113 ntBASIC0.9□□□□□ -2.27
VAPBO95292 AC069113.1-201ENST00000517763 267 ntBASIC0.9□□□□□ -2.27
VAPBO95292 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.9□□□□□ -2.27
VAPBO95292 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.9□□□□□ -2.27
VAPBO95292 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.9□□□□□ -2.27
VAPBO95292 RSL24D1P11-201ENST00000591045 491 ntBASIC0.9□□□□□ -2.27
VAPBO95292 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.9□□□□□ -2.27
VAPBO95292 AL078595.3-201ENST00000623815 1166 ntBASIC0.9□□□□□ -2.27
VAPBO95292 RNU1-124P-201ENST00000363861 145 ntBASIC0.89□□□□□ -2.27
VAPBO95292 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
VAPBO95292 SNORA4.2-201ENST00000365313 147 ntBASIC0.89□□□□□ -2.27
VAPBO95292 SNORA18.2-201ENST00000383865 132 ntBASIC0.89□□□□□ -2.27
VAPBO95292 MIR515-2-201ENST00000384883 83 ntBASIC0.89□□□□□ -2.27
VAPBO95292 MIR515-1-201ENST00000384884 83 ntBASIC0.89□□□□□ -2.27
VAPBO95292 RNU6-1093P-201ENST00000391194 107 ntBASIC0.89□□□□□ -2.27
VAPBO95292 MIR1283-1-201ENST00000408494 87 ntBASIC0.89□□□□□ -2.27
VAPBO95292 AC012306.1-201ENST00000423267 114 ntBASIC0.89□□□□□ -2.27
VAPBO95292 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.89□□□□□ -2.27
VAPBO95292 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.89□□□□□ -2.27
VAPBO95292 HMGN1P7-201ENST00000491722 313 ntBASIC0.89□□□□□ -2.27
VAPBO95292 AC005840.1-201ENST00000498412 377 ntBASIC0.89□□□□□ -2.27
VAPBO95292 SNORD116-28-201ENST00000516123 91 ntBASIC0.89□□□□□ -2.27
VAPBO95292 CYCSP23-201ENST00000519781 313 ntBASIC0.89□□□□□ -2.27
VAPBO95292 CBX3P8-201ENST00000532412 525 ntBASIC0.89□□□□□ -2.27
VAPBO95292 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.89□□□□□ -2.27
VAPBO95292 AC008751.2-201ENST00000597885 980 ntBASIC0.89□□□□□ -2.27
VAPBO95292 AP001836.1-201ENST00000604675 523 ntBASIC0.89□□□□□ -2.27
VAPBO95292 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.89□□□□□ -2.27
VAPBO95292 uc_338.11-201ENST00000619132 160 ntBASIC0.89□□□□□ -2.27
VAPBO95292 AC027335.2-201ENST00000624030 375 ntBASIC0.89□□□□□ -2.27
VAPBO95292 AC068647.2-201ENST00000637380 353 ntBASIC0.89□□□□□ -2.27
VAPBO95292 BX322639.1-202ENST00000423987 2213 ntBASIC0.89□□□□□ -2.27
VAPBO95292 RNU6-562P-201ENST00000362731 107 ntBASIC0.88□□□□□ -2.27
VAPBO95292 RNY4P34-201ENST00000364779 95 ntBASIC0.88□□□□□ -2.27
VAPBO95292 Y_RNA.338-201ENST00000365320 114 ntBASIC0.88□□□□□ -2.27
VAPBO95292 SNORA36A-201ENST00000384221 132 ntBASIC0.88□□□□□ -2.27
VAPBO95292 RNU6-950P-201ENST00000384651 107 ntBASIC0.88□□□□□ -2.27
VAPBO95292 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
VAPBO95292 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.88□□□□□ -2.27
VAPBO95292 HMGN1P12-201ENST00000499125 195 ntBASIC0.88□□□□□ -2.27
VAPBO95292 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.88□□□□□ -2.27
VAPBO95292 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.88□□□□□ -2.27
VAPBO95292 AC091874.1-201ENST00000511402 339 ntBASIC0.88□□□□□ -2.27
VAPBO95292 TRMT112P2-201ENST00000512910 132 ntBASIC0.88□□□□□ -2.27
VAPBO95292 RNU6-1146P-201ENST00000516282 102 ntBASIC0.88□□□□□ -2.27
VAPBO95292 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.88□□□□□ -2.27
VAPBO95292 AL442163.3-201ENST00000554110 156 ntBASIC0.88□□□□□ -2.27
VAPBO95292 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.88□□□□□ -2.27
VAPBO95292 AC109446.2-201ENST00000567872 497 ntBASIC0.88□□□□□ -2.27
VAPBO95292 AL021879.1-201ENST00000611756 288 ntBASIC0.88□□□□□ -2.27
VAPBO95292 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.88□□□□□ -2.27
VAPBO95292 MIR338-201ENST00000636369 67 ntBASIC0.88□□□□□ -2.27
VAPBO95292 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
VAPBO95292 SNORD114-27-201ENST00000363766 70 ntBASIC0.87□□□□□ -2.27
VAPBO95292 RNU6-1029P-201ENST00000384109 107 ntBASIC0.87□□□□□ -2.27
VAPBO95292 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
VAPBO95292 AL356776.1-201ENST00000406574 447 ntBASIC0.87□□□□□ -2.27
VAPBO95292 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.87□□□□□ -2.27
VAPBO95292 C1DP4-201ENST00000455429 424 ntBASIC0.87□□□□□ -2.27
VAPBO95292 Y_RNA.638-201ENST00000459374 113 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms