Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CASC19-280ENST00000642102 1351 ntBASIC2.4□□□□□ -2.02
RTN3O95197 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.4□□□□□ -2.03
RTN3O95197 RNU6-234P-201ENST00000365229 104 ntBASIC2.4□□□□□ -2.03
RTN3O95197 RNU4-52P-201ENST00000384209 138 ntBASIC2.4□□□□□ -2.03
RTN3O95197 MIR29C-201ENST00000385231 88 ntBASIC2.4□□□□□ -2.03
RTN3O95197 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
RTN3O95197 MTND3P8-201ENST00000412909 339 ntBASIC2.4□□□□□ -2.03
RTN3O95197 RPS26P42-201ENST00000413485 326 ntBASIC2.4□□□□□ -2.03
RTN3O95197 AL353705.4-201ENST00000449661 238 ntBASIC2.4□□□□□ -2.03
RTN3O95197 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.4□□□□□ -2.03
RTN3O95197 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.4□□□□□ -2.03
RTN3O95197 PPP1R2P5-201ENST00000457256 603 ntBASIC2.4□□□□□ -2.03
RTN3O95197 snoU13.6-201ENST00000458785 104 ntBASIC2.4□□□□□ -2.03
RTN3O95197 AC107032.1-201ENST00000485945 480 ntBASIC2.4□□□□□ -2.03
RTN3O95197 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.4□□□□□ -2.03
RTN3O95197 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
RTN3O95197 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.4□□□□□ -2.03
RTN3O95197 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.4□□□□□ -2.03
RTN3O95197 SNRPGP18-201ENST00000553000 214 ntBASIC2.4□□□□□ -2.03
RTN3O95197 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.4□□□□□ -2.03
RTN3O95197 MIR1273D-201ENST00000577266 86 ntBASIC2.4□□□□□ -2.03
RTN3O95197 MIR4790-201ENST00000577799 79 ntBASIC2.4□□□□□ -2.03
RTN3O95197 MIR4529-201ENST00000578110 78 ntBASIC2.4□□□□□ -2.03
RTN3O95197 RPL17P51-201ENST00000605218 238 ntBASIC2.4□□□□□ -2.03
RTN3O95197 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
RTN3O95197 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.4□□□□□ -2.03
RTN3O95197 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RTN3O95197 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RTN3O95197 RNU6-1159P-201ENST00000362933 107 ntBASIC2.39□□□□□ -2.03
RTN3O95197 SNORD14D-201ENST00000384390 87 ntBASIC2.39□□□□□ -2.03
RTN3O95197 RNU6-1093P-201ENST00000391194 107 ntBASIC2.39□□□□□ -2.03
RTN3O95197 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.39□□□□□ -2.03
RTN3O95197 EIF4EP2-201ENST00000422816 654 ntBASIC2.39□□□□□ -2.03
RTN3O95197 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.39□□□□□ -2.03
RTN3O95197 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.39□□□□□ -2.03
RTN3O95197 RPL31P58-201ENST00000469001 379 ntBASIC2.39□□□□□ -2.03
RTN3O95197 AC093259.1-201ENST00000509755 300 ntBASIC2.39□□□□□ -2.03
RTN3O95197 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.39□□□□□ -2.03
RTN3O95197 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.39□□□□□ -2.03
RTN3O95197 RNU1-54P-201ENST00000517181 120 ntBASIC2.39□□□□□ -2.03
RTN3O95197 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.39□□□□□ -2.03
RTN3O95197 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.39□□□□□ -2.03
RTN3O95197 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.39□□□□□ -2.03
RTN3O95197 MIR6766-201ENST00000622641 72 ntBASIC2.39□□□□□ -2.03
RTN3O95197 CBX3P1-201ENST00000325243 554 ntBASIC2.38□□□□□ -2.03
RTN3O95197 SNORD50.1-201ENST00000362987 71 ntBASIC2.38□□□□□ -2.03
RTN3O95197 MIR1262-201ENST00000408276 93 ntBASIC2.38□□□□□ -2.03
RTN3O95197 RN7SKP223-201ENST00000410582 62 ntBASIC2.38□□□□□ -2.03
RTN3O95197 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RTN3O95197 DPH3P2-201ENST00000422618 250 ntBASIC2.38□□□□□ -2.03
RTN3O95197 AC018634.1-201ENST00000437554 401 ntBASIC2.38□□□□□ -2.03
RTN3O95197 AC079354.2-201ENST00000453523 154 ntBASIC2.38□□□□□ -2.03
RTN3O95197 snoU13.15-201ENST00000459407 104 ntBASIC2.38□□□□□ -2.03
RTN3O95197 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN3O95197 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN3O95197 AC046134.1-201ENST00000514454 666 ntBASIC2.38□□□□□ -2.03
RTN3O95197 RNA5SP490-201ENST00000517141 136 ntBASIC2.38□□□□□ -2.03
RTN3O95197 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RTN3O95197 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN3O95197 AC090517.1-201ENST00000569307 266 ntBASIC2.38□□□□□ -2.03
RTN3O95197 RPS3AP23-202ENST00000574601 686 ntBASIC2.38□□□□□ -2.03
RTN3O95197 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN3O95197 MIR4448-201ENST00000584360 86 ntBASIC2.38□□□□□ -2.03
RTN3O95197 AC078899.2-201ENST00000595282 212 ntBASIC2.38□□□□□ -2.03
RTN3O95197 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN3O95197 AC009318.2-201ENST00000610917 651 ntBASIC2.38□□□□□ -2.03
RTN3O95197 AC137590.2-201ENST00000619709 240 ntBASIC2.38□□□□□ -2.03
RTN3O95197 MIR6873-201ENST00000622788 63 ntBASIC2.38□□□□□ -2.03
RTN3O95197 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RTN3O95197 Y_RNA.99-201ENST00000363138 105 ntBASIC2.37□□□□□ -2.03
RTN3O95197 Y_RNA.160-201ENST00000363677 92 ntBASIC2.37□□□□□ -2.03
RTN3O95197 RNU6-306P-201ENST00000384617 107 ntBASIC2.37□□□□□ -2.03
RTN3O95197 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RTN3O95197 FGF7P8-201ENST00000402994 292 ntBASIC2.37□□□□□ -2.03
RTN3O95197 AF186996.7-201ENST00000492781 209 ntBASIC2.37□□□□□ -2.03
RTN3O95197 RNU6-991P-201ENST00000516168 107 ntBASIC2.37□□□□□ -2.03
RTN3O95197 Y_RNA.682-201ENST00000516457 100 ntBASIC2.37□□□□□ -2.03
RTN3O95197 MIR514B-201ENST00000516774 80 ntBASIC2.37□□□□□ -2.03
RTN3O95197 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.37□□□□□ -2.03
RTN3O95197 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.37□□□□□ -2.03
RTN3O95197 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.37□□□□□ -2.03
RTN3O95197 AC002984.1-201ENST00000591692 448 ntBASIC2.37□□□□□ -2.03
RTN3O95197 AL158827.2-201ENST00000602494 330 ntBASIC2.37□□□□□ -2.03
RTN3O95197 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.37□□□□□ -2.03
RTN3O95197 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.37□□□□□ -2.03
RTN3O95197 AL691447.3-201ENST00000635020 330 ntBASIC2.37□□□□□ -2.03
RTN3O95197 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RTN3O95197 MTND5P6-201ENST00000422338 1798 ntBASIC2.36□□□□□ -2.03
RTN3O95197 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RTN3O95197 RNU6-767P-201ENST00000384132 107 ntBASIC2.36□□□□□ -2.03
RTN3O95197 MIR518A2-201ENST00000384966 87 ntBASIC2.36□□□□□ -2.03
RTN3O95197 RNU6-876P-201ENST00000391295 104 ntBASIC2.36□□□□□ -2.03
RTN3O95197 U3.40-201ENST00000408706 208 ntBASIC2.36□□□□□ -2.03
RTN3O95197 RNU2-41P-201ENST00000410991 178 ntBASIC2.36□□□□□ -2.03
RTN3O95197 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.36□□□□□ -2.03
RTN3O95197 HMGB1P18-201ENST00000438801 619 ntBASIC2.36□□□□□ -2.03
RTN3O95197 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.36□□□□□ -2.03
RTN3O95197 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RTN3O95197 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.36□□□□□ -2.03
RTN3O95197 OR2AQ1P-201ENST00000451972 200 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms