Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 SNORD13-201ENST00000459299 104 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.43□□□□□ -2.18
UPK3AO75631 AC008628.2-201ENST00000502605 298 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 ATP5EP1-201ENST00000510257 156 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 SNORD60.2-201ENST00000516883 86 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK3AO75631 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3AO75631 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3AO75631 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3AO75631 CYP4A27P-201ENST00000567218 190 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK3AO75631 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3AO75631 RPL17P51-201ENST00000605218 238 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3AO75631 AC009541.1-201ENST00000438279 2662 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3AO75631 RNU4-66P-201ENST00000365199 138 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 SNORD116-9-201ENST00000384000 95 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 RNU6-439P-201ENST00000384188 106 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 SNORD116-3-201ENST00000384287 95 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 RNU6-1119P-201ENST00000384349 108 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 SNORD116-7-201ENST00000384404 95 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 SNORD116-5-201ENST00000384462 95 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK3AO75631 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK3AO75631 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
UPK3AO75631 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.42□□□□□ -2.18
UPK3AO75631 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.42□□□□□ -2.18
UPK3AO75631 AC021146.2-201ENST00000504736 556 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 AC097473.1-201ENST00000508142 408 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 RNU5F-4P-201ENST00000516581 114 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 RNU6-612P-201ENST00000516909 102 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 RNU6-323P-201ENST00000521915 107 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 AC104576.1-201ENST00000524225 88 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 CENPUP1-201ENST00000526649 1202 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.42□□□□□ -2.18
UPK3AO75631 AC025423.5-201ENST00000550230 219 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 EIF4A1P12-201ENST00000551910 141 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK3AO75631 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK3AO75631 MIR5094-201ENST00000578766 85 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 AL357078.3-201ENST00000607528 618 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK3AO75631 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK3AO75631 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
UPK3AO75631 MTND5P9-201ENST00000503854 1755 ntBASIC1.42□□□□□ -2.18
UPK3AO75631 RNU1-17P-201ENST00000363022 152 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 RNA5SP99-201ENST00000364020 114 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 SNORA32.2-201ENST00000384049 122 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 RNU6-1042P-201ENST00000384204 107 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 RNA5SP213-201ENST00000391031 106 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 MIR1267-201ENST00000408723 78 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 RPL21P111-201ENST00000418453 477 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 AC139712.2-201ENST00000424302 339 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 MTCO3P46-201ENST00000425787 232 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 FTH1P12-201ENST00000432137 551 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3AO75631 RNU7-14P-201ENST00000459331 62 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 RNU6-1037P-201ENST00000459571 107 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.41□□□□□ -2.18
UPK3AO75631 RPL36AP21-201ENST00000490372 323 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 RNU6-1098P-201ENST00000516772 96 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 AP005597.4-201ENST00000526762 229 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3AO75631 AP003034.1-201ENST00000534621 422 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3AO75631 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3AO75631 AL118558.2-201ENST00000556294 238 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.41□□□□□ -2.18
UPK3AO75631 AC090517.1-201ENST00000569307 266 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 AP001330.5-201ENST00000607176 411 ntBASIC1.41□□□□□ -2.18
UPK3AO75631 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK3AO75631 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
UPK3AO75631 RNU6-112P-201ENST00000363599 104 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 Y_RNA.378-201ENST00000365652 113 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 SNORA69-201ENST00000383895 132 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 RNU6-997P-201ENST00000384725 107 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 AC012306.1-201ENST00000423267 114 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK3AO75631 MTND3P9-201ENST00000429526 346 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 snoU13.6-201ENST00000458785 104 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 RNU1-98P-201ENST00000458992 160 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 TOMM22P6-201ENST00000465035 409 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 AC083798.1-201ENST00000472671 131 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 AC114801.2-201ENST00000503825 781 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK3AO75631 AC087854.1-201ENST00000519706 414 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 AC104383.1-201ENST00000530297 370 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 HMGB1P33-201ENST00000563485 527 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 AC064836.2-201ENST00000609491 462 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 AC017083.3-201ENST00000609955 700 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 AL121757.2-201ENST00000611223 313 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 uc_338.5-201ENST00000611839 155 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 AC103705.1-201ENST00000619013 241 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 MIR6863-201ENST00000636112 90 ntBASIC1.4□□□□□ -2.19
UPK3AO75631 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 416.1 ms