Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.31□□□□□ -2.46
USH2AO75445 NACAP3-201ENST00000552100 481 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 MIR3612-201ENST00000579753 87 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AP003465.2-201ENST00000602571 373 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 U8.5-201ENST00000364528 136 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 SNORA25B-201ENST00000365507 128 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 MIR873-201ENST00000401120 77 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 RNA5SP163-201ENST00000410304 99 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.31□□□□□ -2.46
USH2AO75445 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.31□□□□□ -2.46
USH2AO75445 AL031281.1-201ENST00000604049 488 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 RNA5SP517-201ENST00000364724 117 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 SNORA1-201ENST00000384107 130 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 MIR1302-8-201ENST00000408342 128 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 MTCO3P12-201ENST00000416718 547 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AL356583.2-201ENST00000426536 280 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AL714022.1-201ENST00000439897 151 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AC116337.2-201ENST00000477662 156 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 RNU6-897P-201ENST00000517135 105 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.32□□□□□ -2.46
USH2AO75445 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.32□□□□□ -2.46
USH2AO75445 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.32□□□□□ -2.46
USH2AO75445 AL360181.4-201ENST00000621752 134 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AC083799.1-201ENST00000366451 910 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AC098831.1-201ENST00000440661 216 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.32□□□□□ -2.46
USH2AO75445 AC104982.1-201ENST00000478775 574 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AC097462.1-201ENST00000514125 324 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AC021146.6-201ENST00000514659 117 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.32□□□□□ -2.46
USH2AO75445 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.32□□□□□ -2.46
USH2AO75445 AC068792.1-201ENST00000621354 417 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.32□□□□□ -2.46
USH2AO75445 RNU6-428P-201ENST00000362942 107 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 MIR597-201ENST00000384968 97 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AC087499.4-201ENST00000448505 178 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 SNORD79.1-201ENST00000516069 84 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AL132657.2-201ENST00000564417 358 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
USH2AO75445 MIR147A-201ENST00000385079 72 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 RNU11-3P-201ENST00000391111 133 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.32□□□□□ -2.46
USH2AO75445 AC108019.1-201ENST00000512540 175 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AC074344.1-201ENST00000512823 224 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.32□□□□□ -2.46
USH2AO75445 AP000403.1-201ENST00000603349 851 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 AC068057.2-201ENST00000624047 895 ntBASIC-0.32□□□□□ -2.46
USH2AO75445 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.33□□□□□ -2.46
USH2AO75445 MIR204-201ENST00000385200 110 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
USH2AO75445 MTCO3P10-201ENST00000455912 772 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.33□□□□□ -2.46
USH2AO75445 AL391813.1-201ENST00000603098 260 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC004853.1-201ENST00000604902 698 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC136475.10-201ENST00000620253 385 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 ZNF299P-201ENST00000406845 1804 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
USH2AO75445 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 RNU4-28P-201ENST00000364739 141 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 SNORD105-201ENST00000386910 85 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 RNU4-46P-201ENST00000410818 138 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 RNA5SP100-201ENST00000410903 110 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 RNA5SP59-201ENST00000410922 110 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 MTND1P3-201ENST00000484956 952 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC027419.1-201ENST00000522976 328 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 HMGB1P33-201ENST00000563485 527 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC019131.2-201ENST00000609071 870 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC139769.3-201ENST00000618383 175 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 uc_338.16-201ENST00000621804 95 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 SEC63P2-201ENST00000503863 1939 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 RNY4P16-201ENST00000364768 94 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 RNU4-66P-201ENST00000365199 138 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 MTND2P5-201ENST00000432656 1006 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.33□□□□□ -2.46
USH2AO75445 Z77249.1-201ENST00000444622 1175 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC010424.1-201ENST00000506336 297 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC079140.3-201ENST00000511111 550 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 SNORA31.2-201ENST00000516019 134 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AP003733.2-201ENST00000529409 171 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC023824.3-201ENST00000569003 562 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 HMGB1P51-201ENST00000605166 638 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC055764.2-201ENST00000610089 670 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.33□□□□□ -2.46
USH2AO75445 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms