Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MIR7843-201ENST00000622274 79 ntBASIC1.8□□□□□ -2.12
LCMT2O60294 DUXAP9-208ENST00000622815 614 ntBASIC1.8□□□□□ -2.12
LCMT2O60294 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.8□□□□□ -2.12
LCMT2O60294 AC009541.1-201ENST00000438279 2662 ntBASIC1.8□□□□□ -2.12
LCMT2O60294 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
LCMT2O60294 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
LCMT2O60294 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
LCMT2O60294 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LCMT2O60294 MIR504-201ENST00000385065 83 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 RNU11-3P-201ENST00000391111 133 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 SNORA40.18-201ENST00000391200 128 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 AC019129.1-201ENST00000403786 261 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 AL356432.1-201ENST00000405809 419 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 Y_RNA.599-201ENST00000410489 109 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 RNU6-373P-201ENST00000411247 98 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 AL445685.2-201ENST00000422551 342 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 BX510359.4-201ENST00000423750 193 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 UBE2V1P4-201ENST00000425374 344 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 HMGN2P3-201ENST00000433603 273 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 HMGN2P5-201ENST00000436882 273 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 MTND1P11-201ENST00000456661 876 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 AC069439.1-201ENST00000494739 167 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.79□□□□□ -2.12
LCMT2O60294 AC016632.1-201ENST00000503994 196 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 PTP4A1P4-201ENST00000512479 322 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 RNU6-256P-201ENST00000516747 97 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 RNU2-44P-201ENST00000516795 194 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 RNU6-1314P-201ENST00000517139 104 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 AP005660.1-201ENST00000522972 293 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.79□□□□□ -2.12
LCMT2O60294 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.79□□□□□ -2.12
LCMT2O60294 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.79□□□□□ -2.12
LCMT2O60294 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.79□□□□□ -2.12
LCMT2O60294 AL158827.2-201ENST00000602494 330 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 Z98751.3-201ENST00000604447 521 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.79□□□□□ -2.12
LCMT2O60294 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.79□□□□□ -2.12
LCMT2O60294 AL691447.3-201ENST00000635020 330 ntBASIC1.79□□□□□ -2.12
LCMT2O60294 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LCMT2O60294 AC092268.1-201ENST00000342691 405 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 Y_RNA.414-201ENST00000384011 101 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 SNORD14D-201ENST00000384390 87 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 Y_RNA.505-201ENST00000384489 102 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 RNU6-831P-201ENST00000384548 107 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 RNU6-95P-201ENST00000384697 107 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 BTF3L4P2-201ENST00000392798 346 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 MIR1277-201ENST00000408536 78 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 MIR1283-2-201ENST00000408621 87 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 RNA5SP201-201ENST00000410316 124 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 Y_RNA.619-201ENST00000410951 90 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 EIF1P1-201ENST00000421436 341 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 MTND2P29-201ENST00000438595 412 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 AC082651.2-201ENST00000496833 166 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 AP005639.2-201ENST00000527592 928 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LCMT2O60294 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.78□□□□□ -2.12
LCMT2O60294 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.78□□□□□ -2.12
LCMT2O60294 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
LCMT2O60294 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.78□□□□□ -2.12
LCMT2O60294 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.78□□□□□ -2.12
LCMT2O60294 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.78□□□□□ -2.12
LCMT2O60294 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LCMT2O60294 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
LCMT2O60294 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
LCMT2O60294 AL356292.1-201ENST00000283110 373 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 Y_RNA.100-201ENST00000363141 102 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 Y_RNA.123-201ENST00000363338 102 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 Y_RNA.135-201ENST00000363439 95 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 Y_RNA.151-201ENST00000363566 112 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
LCMT2O60294 RNU6-128P-201ENST00000383976 107 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 RNU6-378P-201ENST00000384324 107 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 SNORA8-201ENST00000384574 139 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 U8.13-201ENST00000390842 128 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 RNA5SP465-201ENST00000391195 109 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 MTCYBP2-201ENST00000407745 171 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 MIR1289-2-201ENST00000408360 111 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 ZNF885P-201ENST00000420174 1098 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.77□□□□□ -2.13
LCMT2O60294 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.77□□□□□ -2.13
LCMT2O60294 CBX3P6-201ENST00000430257 527 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 FTH1P25-201ENST00000447665 469 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.77□□□□□ -2.13
LCMT2O60294 AC104564.1-201ENST00000493028 407 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 MTCO1P29-201ENST00000496868 288 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 AC021146.2-201ENST00000504736 556 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 AC005741.1-201ENST00000511094 432 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 MRPS36P4-201ENST00000534436 298 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 MIR3976-201ENST00000606807 139 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 PCGEM1.1-201ENST00000613431 131 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 AC002553.4-201ENST00000616896 331 ntBASIC1.77□□□□□ -2.13
LCMT2O60294 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.77□□□□□ -2.13
LCMT2O60294 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LCMT2O60294 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
LCMT2O60294 Y_RNA.212-201ENST00000364177 102 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 MIR521-1-201ENST00000384902 87 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 SRIP3-201ENST00000413200 219 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms