Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC010486.2-201ENST00000505572 483 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 AK3P2-201ENST00000507976 429 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.52□□□□□ -2.33
SSNA1O43805 RNA5SP255-201ENST00000516370 107 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 RNU6-1069P-201ENST00000516612 133 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.52□□□□□ -2.33
SSNA1O43805 AC024995.1-201ENST00000523014 93 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SSNA1O43805 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC0.52□□□□□ -2.33
SSNA1O43805 AC080078.2-201ENST00000603766 501 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 GHRLOS.1-201ENST00000610995 70 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 AL136221.1-201ENST00000621449 509 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 AC138649.3-201ENST00000622154 254 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 AL603839.4-201ENST00000624658 1005 ntBASIC0.52□□□□□ -2.33
SSNA1O43805 RNU1-17P-201ENST00000363022 152 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 RNU6-827P-201ENST00000365553 106 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 MIR549A-201ENST00000385268 96 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.51□□□□□ -2.33
SSNA1O43805 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.51□□□□□ -2.33
SSNA1O43805 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 AC005840.1-201ENST00000498412 377 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 RNU6-948P-201ENST00000516374 107 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.51□□□□□ -2.33
SSNA1O43805 Z99497.2-201ENST00000603634 310 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 AC091805.2-201ENST00000603848 235 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 AL590095.2-201ENST00000604136 117 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 AP001836.1-201ENST00000604675 523 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 AC018714.1-201ENST00000605028 208 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 AL078595.3-201ENST00000623815 1166 ntBASIC0.51□□□□□ -2.33
SSNA1O43805 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.5□□□□□ -2.33
SSNA1O43805 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SSNA1O43805 RNU6-975P-201ENST00000384296 105 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 SNORA80D-201ENST00000384488 135 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 SNORD41-201ENST00000386967 70 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 SNORA12.1-201ENST00000390873 148 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 MIR1289-2-201ENST00000408360 111 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AC084290.1-201ENST00000434995 374 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 MTCO3P18-201ENST00000440206 761 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 MTCO2P6-201ENST00000463134 685 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 RPS27P22-201ENST00000478056 241 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.5□□□□□ -2.33
SSNA1O43805 MTCO3P7-201ENST00000510008 774 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.5□□□□□ -2.33
SSNA1O43805 RNU1-41P-201ENST00000516161 162 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 RNU6-1146P-201ENST00000516282 102 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 RNU1-48P-201ENST00000516400 162 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.5□□□□□ -2.33
SSNA1O43805 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.5□□□□□ -2.33
SSNA1O43805 AC022217.4-201ENST00000604389 163 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AC080078.3-201ENST00000605407 463 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AL353765.1-201ENST00000605514 183 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AC138749.5-201ENST00000611461 208 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AC116165.2-201ENST00000616705 206 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AC011155.2-201ENST00000623202 216 ntBASIC0.5□□□□□ -2.33
SSNA1O43805 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.5□□□□□ -2.33
SSNA1O43805 RNU6-1287P-201ENST00000362914 107 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 SNORA20.2-201ENST00000383922 131 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 RNU6-1060P-201ENST00000384664 107 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.49□□□□□ -2.33
SSNA1O43805 snoU109.3-201ENST00000459477 145 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 SRRM1P2-201ENST00000464531 1192 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 COX6CP14-201ENST00000469580 174 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.49□□□□□ -2.33
SSNA1O43805 RNU6-947P-201ENST00000516264 106 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 MIR3973-201ENST00000579824 107 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 AP000811.1-201ENST00000603803 651 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 AC108706.1-201ENST00000611053 297 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 AC005562.2-201ENST00000618264 111 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 MIR6835-201ENST00000621552 64 ntBASIC0.49□□□□□ -2.33
SSNA1O43805 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.49□□□□□ -2.33
SSNA1O43805 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
SSNA1O43805 RNU6-501P-201ENST00000364072 100 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 RNY1P12-201ENST00000364251 105 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 RNU6-906P-201ENST00000384700 70 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 RN7SKP200-201ENST00000410564 320 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.48□□□□□ -2.33
SSNA1O43805 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.48□□□□□ -2.33
SSNA1O43805 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.48□□□□□ -2.33
SSNA1O43805 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.48□□□□□ -2.33
SSNA1O43805 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.48□□□□□ -2.33
SSNA1O43805 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.48□□□□□ -2.33
SSNA1O43805 AL365184.2-201ENST00000431139 435 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.48□□□□□ -2.33
SSNA1O43805 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.48□□□□□ -2.33
SSNA1O43805 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 AL162395.1-201ENST00000457882 422 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 snoU13.6-201ENST00000458785 104 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 HMGB1P29-201ENST00000505659 499 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 Y_RNA.672-201ENST00000516289 104 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.48□□□□□ -2.33
SSNA1O43805 AC005771.1-201ENST00000585581 349 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.48□□□□□ -2.33
SSNA1O43805 AC097065.2-201ENST00000608159 533 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 MIR8054-201ENST00000620877 86 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.48□□□□□ -2.33
SSNA1O43805 U6.114-201ENST00000636407 96 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 U6.108-201ENST00000637764 58 ntBASIC0.48□□□□□ -2.33
SSNA1O43805 AC099654.13-201ENST00000639774 207 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms