Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AL450472.1-202ENST00000637286 180 ntBASIC1.99□□□□□ -2.09
PHF1O43189 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PHF1O43189 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.99□□□□□ -2.09
PHF1O43189 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
PHF1O43189 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.99□□□□□ -2.09
PHF1O43189 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PHF1O43189 AL359854.1-201ENST00000614203 1594 ntBASIC1.98□□□□□ -2.09
PHF1O43189 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PHF1O43189 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PHF1O43189 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PHF1O43189 Y_RNA.11-201ENST00000362375 109 ntBASIC1.98□□□□□ -2.09
PHF1O43189 Y_RNA.40-201ENST00000362645 93 ntBASIC1.98□□□□□ -2.09
PHF1O43189 Y_RNA.58-201ENST00000362807 102 ntBASIC1.98□□□□□ -2.09
PHF1O43189 Y_RNA.154-201ENST00000363624 102 ntBASIC1.98□□□□□ -2.09
PHF1O43189 RNU6-1059P-201ENST00000363752 98 ntBASIC1.98□□□□□ -2.09
PHF1O43189 RNU4-76P-201ENST00000364509 141 ntBASIC1.98□□□□□ -2.09
PHF1O43189 RNY3P1-201ENST00000365085 102 ntBASIC1.98□□□□□ -2.09
PHF1O43189 RNY3-201ENST00000365484 102 ntBASIC1.98□□□□□ -2.09
PHF1O43189 Y_RNA.404-201ENST00000383978 102 ntBASIC1.98□□□□□ -2.09
PHF1O43189 RNU6-43P-201ENST00000384302 107 ntBASIC1.98□□□□□ -2.09
PHF1O43189 Y_RNA.490-201ENST00000384413 102 ntBASIC1.98□□□□□ -2.09
PHF1O43189 AL079342.1-201ENST00000401460 267 ntBASIC1.98□□□□□ -2.09
PHF1O43189 RNU6-1140P-201ENST00000410517 106 ntBASIC1.98□□□□□ -2.09
PHF1O43189 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.98□□□□□ -2.09
PHF1O43189 AIMP1P2-201ENST00000425294 312 ntBASIC1.98□□□□□ -2.09
PHF1O43189 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.98□□□□□ -2.09
PHF1O43189 RNU6-1053P-201ENST00000515930 101 ntBASIC1.98□□□□□ -2.09
PHF1O43189 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.98□□□□□ -2.09
PHF1O43189 MIR5571-201ENST00000577998 113 ntBASIC1.98□□□□□ -2.09
PHF1O43189 AP000942.3-201ENST00000603702 160 ntBASIC1.98□□□□□ -2.09
PHF1O43189 AL133255.1-201ENST00000606374 441 ntBASIC1.98□□□□□ -2.09
PHF1O43189 MIR3976-201ENST00000606807 139 ntBASIC1.98□□□□□ -2.09
PHF1O43189 AC009229.3-201ENST00000608056 282 ntBASIC1.98□□□□□ -2.09
PHF1O43189 AC096772.1-201ENST00000609146 564 ntBASIC1.98□□□□□ -2.09
PHF1O43189 AL669831.3-213ENST00000636676 183 ntBASIC1.98□□□□□ -2.09
PHF1O43189 MTND5P30-201ENST00000452896 1731 ntBASIC1.97□□□□□ -2.09
PHF1O43189 AC006026.1-201ENST00000444025 1803 ntBASIC1.97□□□□□ -2.09
PHF1O43189 SNORA3A-201ENST00000364113 130 ntBASIC1.97□□□□□ -2.09
PHF1O43189 RNU6-933P-201ENST00000384424 107 ntBASIC1.97□□□□□ -2.09
PHF1O43189 SNORA75.4-201ENST00000391278 119 ntBASIC1.97□□□□□ -2.09
PHF1O43189 Y_RNA.595-201ENST00000410403 105 ntBASIC1.97□□□□□ -2.09
PHF1O43189 RNU6-1245P-201ENST00000411130 106 ntBASIC1.97□□□□□ -2.09
PHF1O43189 RPS20P15-201ENST00000412792 311 ntBASIC1.97□□□□□ -2.09
PHF1O43189 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.97□□□□□ -2.09
PHF1O43189 AC078809.1-201ENST00000427601 140 ntBASIC1.97□□□□□ -2.09
PHF1O43189 MTND3P9-201ENST00000429526 346 ntBASIC1.97□□□□□ -2.09
PHF1O43189 AC023141.11-201ENST00000508864 202 ntBASIC1.97□□□□□ -2.09
PHF1O43189 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.97□□□□□ -2.09
PHF1O43189 AC091874.1-201ENST00000511402 339 ntBASIC1.97□□□□□ -2.09
PHF1O43189 ACA59.1-201ENST00000515966 143 ntBASIC1.97□□□□□ -2.09
PHF1O43189 Y_RNA.675-201ENST00000516389 149 ntBASIC1.97□□□□□ -2.09
PHF1O43189 IGLV3-17-201ENST00000519099 244 ntBASIC1.97□□□□□ -2.09
PHF1O43189 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.97□□□□□ -2.09
PHF1O43189 AC109446.1-201ENST00000566172 220 ntBASIC1.97□□□□□ -2.09
PHF1O43189 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.97□□□□□ -2.09
PHF1O43189 AC067747.1-201ENST00000608026 250 ntBASIC1.97□□□□□ -2.09
PHF1O43189 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.97□□□□□ -2.09
PHF1O43189 AC009318.2-201ENST00000610917 651 ntBASIC1.97□□□□□ -2.09
PHF1O43189 MIR1291-201ENST00000627649 87 ntBASIC1.97□□□□□ -2.09
PHF1O43189 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
PHF1O43189 AL356292.1-201ENST00000283110 373 ntBASIC1.96□□□□□ -2.1
PHF1O43189 RNU1-72P-201ENST00000362976 153 ntBASIC1.96□□□□□ -2.1
PHF1O43189 Y_RNA.813-201ENST00000364639 102 ntBASIC1.96□□□□□ -2.1
PHF1O43189 Y_RNA.473-201ENST00000384333 102 ntBASIC1.96□□□□□ -2.1
PHF1O43189 RNU6-790P-201ENST00000384479 105 ntBASIC1.96□□□□□ -2.1
PHF1O43189 RNU6-310P-201ENST00000384655 107 ntBASIC1.96□□□□□ -2.1
PHF1O43189 MIR544A-201ENST00000384855 91 ntBASIC1.96□□□□□ -2.1
PHF1O43189 Y_RNA.646-201ENST00000410980 101 ntBASIC1.96□□□□□ -2.1
PHF1O43189 AC243428.1-201ENST00000421099 264 ntBASIC1.96□□□□□ -2.1
PHF1O43189 USMG5P1-201ENST00000425964 177 ntBASIC1.96□□□□□ -2.1
PHF1O43189 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.96□□□□□ -2.1
PHF1O43189 AC236972.2-201ENST00000434979 310 ntBASIC1.96□□□□□ -2.1
PHF1O43189 RPL39P29-201ENST00000447779 157 ntBASIC1.96□□□□□ -2.1
PHF1O43189 AC097473.1-201ENST00000508142 408 ntBASIC1.96□□□□□ -2.1
PHF1O43189 AC107222.1-201ENST00000510899 637 ntBASIC1.96□□□□□ -2.1
PHF1O43189 AC005741.1-201ENST00000511094 432 ntBASIC1.96□□□□□ -2.1
PHF1O43189 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.96□□□□□ -2.1
PHF1O43189 MIR5690-201ENST00000583739 73 ntBASIC1.96□□□□□ -2.1
PHF1O43189 AC103810.6-201ENST00000606708 136 ntBASIC1.96□□□□□ -2.1
PHF1O43189 AC012640.5-201ENST00000623897 319 ntBASIC1.96□□□□□ -2.1
PHF1O43189 MTND4LP32-201ENST00000636111 270 ntBASIC1.96□□□□□ -2.1
PHF1O43189 AC073544.1-201ENST00000600110 1595 ntBASIC1.96□□□□□ -2.1
PHF1O43189 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PHF1O43189 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PHF1O43189 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.95□□□□□ -2.1
PHF1O43189 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.95□□□□□ -2.1
PHF1O43189 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PHF1O43189 AC092268.1-201ENST00000342691 405 ntBASIC1.95□□□□□ -2.1
PHF1O43189 SNORD114-19-201ENST00000363072 75 ntBASIC1.95□□□□□ -2.1
PHF1O43189 RNU6-529P-201ENST00000363383 104 ntBASIC1.95□□□□□ -2.1
PHF1O43189 Y_RNA.259-201ENST00000364619 101 ntBASIC1.95□□□□□ -2.1
PHF1O43189 Y_RNA.315-201ENST00000365117 102 ntBASIC1.95□□□□□ -2.1
PHF1O43189 SNORD42.2-201ENST00000365570 69 ntBASIC1.95□□□□□ -2.1
PHF1O43189 RNU6-1286P-201ENST00000383871 107 ntBASIC1.95□□□□□ -2.1
PHF1O43189 RNU1-57P-201ENST00000384491 166 ntBASIC1.95□□□□□ -2.1
PHF1O43189 MIR521-1-201ENST00000384902 87 ntBASIC1.95□□□□□ -2.1
PHF1O43189 SNORA75.6-201ENST00000391318 127 ntBASIC1.95□□□□□ -2.1
PHF1O43189 BTF3L4P2-201ENST00000392798 346 ntBASIC1.95□□□□□ -2.1
PHF1O43189 AL133475.1-201ENST00000404414 305 ntBASIC1.95□□□□□ -2.1
PHF1O43189 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms