Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 Y_RNA.279-201ENST00000364763 95 ntBASIC2.16□□□□□ -2.06
O00370 Y_RNA.473-201ENST00000384333 102 ntBASIC2.16□□□□□ -2.06
O00370 SNORA12-201ENST00000391162 147 ntBASIC2.16□□□□□ -2.06
O00370 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
O00370 CBX3P9-201ENST00000402326 552 ntBASIC2.16□□□□□ -2.06
O00370 AL445646.1-201ENST00000431784 216 ntBASIC2.16□□□□□ -2.06
O00370 RPS3AP52-201ENST00000435639 297 ntBASIC2.16□□□□□ -2.06
O00370 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.16□□□□□ -2.06
O00370 AC092473.1-201ENST00000441098 221 ntBASIC2.16□□□□□ -2.06
O00370 snoU13.6-201ENST00000458785 104 ntBASIC2.16□□□□□ -2.06
O00370 snoU13.14-201ENST00000459372 104 ntBASIC2.16□□□□□ -2.06
O00370 snoU13.15-201ENST00000459407 104 ntBASIC2.16□□□□□ -2.06
O00370 RPS29P27-201ENST00000463711 170 ntBASIC2.16□□□□□ -2.06
O00370 AC104564.1-201ENST00000493028 407 ntBASIC2.16□□□□□ -2.06
O00370 AC145146.1-201ENST00000496370 254 ntBASIC2.16□□□□□ -2.06
O00370 HMGB1P35-201ENST00000503360 598 ntBASIC2.16□□□□□ -2.06
O00370 PTP4A1P4-201ENST00000512479 322 ntBASIC2.16□□□□□ -2.06
O00370 ACA59.1-201ENST00000515966 143 ntBASIC2.16□□□□□ -2.06
O00370 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.16□□□□□ -2.06
O00370 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.16□□□□□ -2.06
O00370 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.16□□□□□ -2.06
O00370 AC243960.4-201ENST00000600532 288 ntBASIC2.16□□□□□ -2.06
O00370 AC078795.3-201ENST00000602913 472 ntBASIC2.16□□□□□ -2.06
O00370 AC124303.1-201ENST00000605703 360 ntBASIC2.16□□□□□ -2.06
O00370 AL133215.3-201ENST00000609801 448 ntBASIC2.16□□□□□ -2.06
O00370 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
O00370 MIR7843-201ENST00000622274 79 ntBASIC2.16□□□□□ -2.06
O00370 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
O00370 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
O00370 AL359851.1-201ENST00000569460 4997 ntBASIC2.15□□□□□ -2.07
O00370 RNU6-845P-201ENST00000362578 103 ntBASIC2.15□□□□□ -2.07
O00370 RNU6-1059P-201ENST00000363752 98 ntBASIC2.15□□□□□ -2.07
O00370 Y_RNA.301-201ENST00000364990 103 ntBASIC2.15□□□□□ -2.07
O00370 SNORA25B-201ENST00000365507 128 ntBASIC2.15□□□□□ -2.07
O00370 RNU6-968P-201ENST00000384076 107 ntBASIC2.15□□□□□ -2.07
O00370 FGF7P8-201ENST00000402994 292 ntBASIC2.15□□□□□ -2.07
O00370 Y_RNA.597-201ENST00000410463 100 ntBASIC2.15□□□□□ -2.07
O00370 MTCO3P46-201ENST00000425787 232 ntBASIC2.15□□□□□ -2.07
O00370 AC027124.2-201ENST00000428249 105 ntBASIC2.15□□□□□ -2.07
O00370 AL645568.3-201ENST00000433683 316 ntBASIC2.15□□□□□ -2.07
O00370 AC107399.1-201ENST00000451226 265 ntBASIC2.15□□□□□ -2.07
O00370 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.15□□□□□ -2.07
O00370 RNA5SP364-201ENST00000516938 78 ntBASIC2.15□□□□□ -2.07
O00370 HSPE1P18-201ENST00000517602 280 ntBASIC2.15□□□□□ -2.07
O00370 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.15□□□□□ -2.07
O00370 MRPS36P4-201ENST00000534436 298 ntBASIC2.15□□□□□ -2.07
O00370 IMMP1LP2-201ENST00000552954 492 ntBASIC2.15□□□□□ -2.07
O00370 AP001094.1-201ENST00000579805 193 ntBASIC2.15□□□□□ -2.07
O00370 MIR548S-201ENST00000581352 82 ntBASIC2.15□□□□□ -2.07
O00370 AC018889.1-201ENST00000605372 397 ntBASIC2.15□□□□□ -2.07
O00370 uc_338.5-201ENST00000611839 155 ntBASIC2.15□□□□□ -2.07
O00370 uc_338.20-201ENST00000621563 178 ntBASIC2.15□□□□□ -2.07
O00370 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.15□□□□□ -2.07
O00370 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
O00370 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
O00370 AC092268.1-201ENST00000342691 405 ntBASIC2.14□□□□□ -2.07
O00370 RNA5SP276-201ENST00000362580 94 ntBASIC2.14□□□□□ -2.07
O00370 SNORA72.1-201ENST00000363485 129 ntBASIC2.14□□□□□ -2.07
O00370 RNU6-944P-201ENST00000364023 107 ntBASIC2.14□□□□□ -2.07
O00370 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
O00370 RN7SKP61-201ENST00000410642 295 ntBASIC2.14□□□□□ -2.07
O00370 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
O00370 AC138393.2-201ENST00000414742 246 ntBASIC2.14□□□□□ -2.07
O00370 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.14□□□□□ -2.07
O00370 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.14□□□□□ -2.07
O00370 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.14□□□□□ -2.07
O00370 MTND3P10-201ENST00000450967 341 ntBASIC2.14□□□□□ -2.07
O00370 FO393415.2-201ENST00000480085 343 ntBASIC2.14□□□□□ -2.07
O00370 AC021146.2-201ENST00000504736 556 ntBASIC2.14□□□□□ -2.07
O00370 SNORA20.3-201ENST00000516880 132 ntBASIC2.14□□□□□ -2.07
O00370 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.14□□□□□ -2.07
O00370 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.14□□□□□ -2.07
O00370 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
O00370 AC109446.1-201ENST00000566172 220 ntBASIC2.14□□□□□ -2.07
O00370 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.14□□□□□ -2.07
O00370 Z98751.3-201ENST00000604447 521 ntBASIC2.14□□□□□ -2.07
O00370 AL022345.1-201ENST00000607292 135 ntBASIC2.14□□□□□ -2.07
O00370 MIR8076-201ENST00000611401 83 ntBASIC2.14□□□□□ -2.07
O00370 SNORA43.4-201ENST00000629559 138 ntBASIC2.14□□□□□ -2.07
O00370 ZNF355P-201ENST00000427301 3216 ntBASIC2.14□□□□□ -2.07
O00370 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
O00370 RNU6-1159P-201ENST00000362933 107 ntBASIC2.13□□□□□ -2.07
O00370 Y_RNA.303-201ENST00000364998 94 ntBASIC2.13□□□□□ -2.07
O00370 RNU6-142P-201ENST00000384019 107 ntBASIC2.13□□□□□ -2.07
O00370 MIR29B2-201ENST00000385055 81 ntBASIC2.13□□□□□ -2.07
O00370 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
O00370 MIR676-201ENST00000390702 67 ntBASIC2.13□□□□□ -2.07
O00370 MIR208B-201ENST00000401172 77 ntBASIC2.13□□□□□ -2.07
O00370 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.13□□□□□ -2.07
O00370 PDCL2P1-201ENST00000419302 352 ntBASIC2.13□□□□□ -2.07
O00370 RPL23AP95-201ENST00000426806 265 ntBASIC2.13□□□□□ -2.07
O00370 HMGB1P18-201ENST00000438801 619 ntBASIC2.13□□□□□ -2.07
O00370 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.13□□□□□ -2.07
O00370 MTND1P17-201ENST00000448961 204 ntBASIC2.13□□□□□ -2.07
O00370 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
O00370 UBL5P3-201ENST00000475112 231 ntBASIC2.13□□□□□ -2.07
O00370 MTND5P5-201ENST00000503764 376 ntBASIC2.13□□□□□ -2.07
O00370 AC046134.1-201ENST00000514454 666 ntBASIC2.13□□□□□ -2.07
O00370 MIR449C-201ENST00000516047 92 ntBASIC2.13□□□□□ -2.07
O00370 SNORA48.11-201ENST00000517015 89 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms