Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 SNORA36A-201ENST00000384221 132 ntBASIC1.06□□□□□ -2.24
DFFAO00273 Y_RNA.504-201ENST00000384481 104 ntBASIC1.06□□□□□ -2.24
DFFAO00273 AL031577.2-201ENST00000404133 280 ntBASIC1.06□□□□□ -2.24
DFFAO00273 AL117342.1-201ENST00000404861 406 ntBASIC1.06□□□□□ -2.24
DFFAO00273 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.06□□□□□ -2.24
DFFAO00273 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.06□□□□□ -2.24
DFFAO00273 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.06□□□□□ -2.24
DFFAO00273 AL163973.1-201ENST00000484753 577 ntBASIC1.06□□□□□ -2.24
DFFAO00273 HMGN1P7-201ENST00000491722 313 ntBASIC1.06□□□□□ -2.24
DFFAO00273 RPS23P5-201ENST00000495419 428 ntBASIC1.06□□□□□ -2.24
DFFAO00273 AC008628.2-201ENST00000502605 298 ntBASIC1.06□□□□□ -2.24
DFFAO00273 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
DFFAO00273 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.06□□□□□ -2.24
DFFAO00273 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.06□□□□□ -2.24
DFFAO00273 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.06□□□□□ -2.24
DFFAO00273 RNU6-856P-201ENST00000516959 98 ntBASIC1.06□□□□□ -2.24
DFFAO00273 MTCO3P23-201ENST00000561363 289 ntBASIC1.06□□□□□ -2.24
DFFAO00273 AC109446.2-201ENST00000567872 497 ntBASIC1.06□□□□□ -2.24
DFFAO00273 SNORA59B-202ENST00000578183 701 ntBASIC1.06□□□□□ -2.24
DFFAO00273 AC011458.1-201ENST00000604034 617 ntBASIC1.06□□□□□ -2.24
DFFAO00273 SNORA43.4-201ENST00000629559 138 ntBASIC1.06□□□□□ -2.24
DFFAO00273 MTND5P35-201ENST00000557537 1720 ntBASIC1.06□□□□□ -2.24
DFFAO00273 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
DFFAO00273 SNORA40.3-201ENST00000390964 122 ntBASIC1.05□□□□□ -2.24
DFFAO00273 MIR208B-201ENST00000401172 77 ntBASIC1.05□□□□□ -2.24
DFFAO00273 EIF1P1-201ENST00000421436 341 ntBASIC1.05□□□□□ -2.24
DFFAO00273 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
DFFAO00273 MTCO3P29-201ENST00000432119 779 ntBASIC1.05□□□□□ -2.24
DFFAO00273 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.05□□□□□ -2.24
DFFAO00273 AC069257.2-201ENST00000441819 155 ntBASIC1.05□□□□□ -2.24
DFFAO00273 AL033528.1-201ENST00000453780 140 ntBASIC1.05□□□□□ -2.24
DFFAO00273 GMFBP1-201ENST00000467831 427 ntBASIC1.05□□□□□ -2.24
DFFAO00273 RNU6-1041P-201ENST00000516254 102 ntBASIC1.05□□□□□ -2.24
DFFAO00273 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.05□□□□□ -2.24
DFFAO00273 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.05□□□□□ -2.24
DFFAO00273 RAB11AP2-201ENST00000545905 639 ntBASIC1.05□□□□□ -2.24
DFFAO00273 AGGF1P4-201ENST00000568249 801 ntBASIC1.05□□□□□ -2.24
DFFAO00273 AC064807.4-201ENST00000607201 407 ntBASIC1.05□□□□□ -2.24
DFFAO00273 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.05□□□□□ -2.24
DFFAO00273 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.05□□□□□ -2.24
DFFAO00273 AL136221.1-201ENST00000621449 509 ntBASIC1.05□□□□□ -2.24
DFFAO00273 AC079248.2-201ENST00000623779 326 ntBASIC1.05□□□□□ -2.24
DFFAO00273 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
DFFAO00273 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
DFFAO00273 RNU1-22P-201ENST00000363334 158 ntBASIC1.04□□□□□ -2.24
DFFAO00273 Y_RNA.132-201ENST00000363421 102 ntBASIC1.04□□□□□ -2.24
DFFAO00273 RNU6-553P-201ENST00000364047 96 ntBASIC1.04□□□□□ -2.24
DFFAO00273 MIR194-1-201ENST00000384892 85 ntBASIC1.04□□□□□ -2.24
DFFAO00273 USP9YP28-201ENST00000435142 589 ntBASIC1.04□□□□□ -2.24
DFFAO00273 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
DFFAO00273 AC022364.2-201ENST00000457963 554 ntBASIC1.04□□□□□ -2.24
DFFAO00273 RNU7-125P-201ENST00000458760 62 ntBASIC1.04□□□□□ -2.24
DFFAO00273 RNU6-232P-201ENST00000517144 64 ntBASIC1.04□□□□□ -2.24
DFFAO00273 AC245014.2-201ENST00000603689 287 ntBASIC1.04□□□□□ -2.24
DFFAO00273 AC246785.4-201ENST00000605374 287 ntBASIC1.04□□□□□ -2.24
DFFAO00273 AL353149.1-201ENST00000610667 244 ntBASIC1.04□□□□□ -2.24
DFFAO00273 RNU6-877P-201ENST00000383868 107 ntBASIC1.03□□□□□ -2.24
DFFAO00273 RNU6-1065P-201ENST00000384513 106 ntBASIC1.03□□□□□ -2.24
DFFAO00273 AP000275.1-201ENST00000411943 390 ntBASIC1.03□□□□□ -2.24
DFFAO00273 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.03□□□□□ -2.24
DFFAO00273 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
DFFAO00273 AC010099.3-201ENST00000423896 409 ntBASIC1.03□□□□□ -2.24
DFFAO00273 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.03□□□□□ -2.24
DFFAO00273 SCARNA18-201ENST00000459004 134 ntBASIC1.03□□□□□ -2.24
DFFAO00273 snoU13.27-201ENST00000459278 104 ntBASIC1.03□□□□□ -2.24
DFFAO00273 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.03□□□□□ -2.24
DFFAO00273 MTND1P22-201ENST00000510572 951 ntBASIC1.03□□□□□ -2.24
DFFAO00273 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.03□□□□□ -2.24
DFFAO00273 RN7SKP265-201ENST00000516448 223 ntBASIC1.03□□□□□ -2.24
DFFAO00273 AC069113.1-201ENST00000517763 267 ntBASIC1.03□□□□□ -2.24
DFFAO00273 AC064872.1-201ENST00000604823 1072 ntBASIC1.03□□□□□ -2.24
DFFAO00273 AL136370.1-201ENST00000608166 691 ntBASIC1.03□□□□□ -2.24
DFFAO00273 AL050303.3-201ENST00000613704 284 ntBASIC1.03□□□□□ -2.24
DFFAO00273 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.03□□□□□ -2.24
DFFAO00273 AC008147.4-201ENST00000617570 1204 ntBASIC1.03□□□□□ -2.24
DFFAO00273 AF246928.1-201ENST00000623768 87 ntBASIC1.03□□□□□ -2.24
DFFAO00273 SNORD114-27-201ENST00000363766 70 ntBASIC1.02□□□□□ -2.25
DFFAO00273 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
DFFAO00273 Y_RNA.399-201ENST00000383955 105 ntBASIC1.02□□□□□ -2.25
DFFAO00273 RNU6-331P-201ENST00000384724 107 ntBASIC1.02□□□□□ -2.25
DFFAO00273 MTCO2P34-201ENST00000421994 607 ntBASIC1.02□□□□□ -2.25
DFFAO00273 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.02□□□□□ -2.25
DFFAO00273 AC012306.1-201ENST00000423267 114 ntBASIC1.02□□□□□ -2.25
DFFAO00273 CYCSP46-201ENST00000423569 204 ntBASIC1.02□□□□□ -2.25
DFFAO00273 CST2P1-201ENST00000425770 87 ntBASIC1.02□□□□□ -2.25
DFFAO00273 AC067942.3-201ENST00000512025 362 ntBASIC1.02□□□□□ -2.25
DFFAO00273 AC090115.3-201ENST00000553218 849 ntBASIC1.02□□□□□ -2.25
DFFAO00273 AC008015.1-201ENST00000555505 465 ntBASIC1.02□□□□□ -2.25
DFFAO00273 CYP3A52P-201ENST00000563326 91 ntBASIC1.02□□□□□ -2.25
DFFAO00273 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.02□□□□□ -2.25
DFFAO00273 MIR3941-201ENST00000582572 103 ntBASIC1.02□□□□□ -2.25
DFFAO00273 AP001596.2-201ENST00000608410 312 ntBASIC1.02□□□□□ -2.25
DFFAO00273 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
DFFAO00273 RNA5SP327-201ENST00000362494 101 ntBASIC1.01□□□□□ -2.25
DFFAO00273 RNU6-545P-201ENST00000362681 104 ntBASIC1.01□□□□□ -2.25
DFFAO00273 RNY1P10-201ENST00000363268 113 ntBASIC1.01□□□□□ -2.25
DFFAO00273 SNORA25.8-201ENST00000364831 128 ntBASIC1.01□□□□□ -2.25
DFFAO00273 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
DFFAO00273 RNU6-456P-201ENST00000384493 107 ntBASIC1.01□□□□□ -2.25
DFFAO00273 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms