Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC087854.1-201ENST00000519706 414 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-323P-201ENST00000521915 107 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC087441.2-201ENST00000529141 262 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC025423.5-201ENST00000550230 219 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 TRAV32-201ENST00000553993 340 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 PSMA3P-201ENST00000555485 635 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC093249.1-201ENST00000567049 203 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 CPDP1-201ENST00000579660 283 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC100830.2-201ENST00000581636 240 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR3942-201ENST00000585264 109 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPL30P11-203ENST00000598995 310 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC073410.2-201ENST00000603240 332 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC107304.1-201ENST00000604229 296 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC068944.2-201ENST00000610373 403 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL138726.1-201ENST00000614873 333 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC006504.8-201ENST00000621046 635 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 SNORA43.4-201ENST00000629559 138 ntBASIC1.6□□□□□ -2.15
TMX2-CTNND1H3BSU7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-527P-201ENST00000363425 104 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-831P-201ENST00000384548 107 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-1222P-201ENST00000384615 107 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR450B-201ENST00000401182 78 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL033519.2-201ENST00000403958 392 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL591043.1-201ENST00000432461 424 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 USP9YP28-201ENST00000435142 589 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 NDUFA5P4-201ENST00000436704 385 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 MTCO3P18-201ENST00000440206 761 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL359672.1-201ENST00000442302 409 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 MTND1P11-201ENST00000456661 876 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC068781.1-201ENST00000488231 618 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 IMMP1LP2-201ENST00000552954 492 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC091135.1-201ENST00000585943 307 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL078605.1-201ENST00000603529 500 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AP001836.1-201ENST00000604675 523 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL355297.2-201ENST00000604792 129 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL138963.2-201ENST00000605137 226 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL357078.3-201ENST00000607528 618 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR3662-201ENST00000637030 95 ntBASIC1.59□□□□□ -2.15
TMX2-CTNND1H3BSU7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TMX2-CTNND1H3BSU7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.59□□□□□ -2.16
TMX2-CTNND1H3BSU7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1252P-201ENST00000363054 104 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU1-23P-201ENST00000363361 144 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 SNORD113-7-201ENST00000363762 77 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 SNORA26.3-201ENST00000391119 136 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AP000275.1-201ENST00000411943 390 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 VN1R36P-201ENST00000414936 291 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 Z82205.1-201ENST00000428456 297 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL133396.1-201ENST00000432048 687 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL353689.1-201ENST00000438895 199 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 NFU1P2-201ENST00000448700 469 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AMD1P1-201ENST00000457220 922 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1314P-201ENST00000517139 104 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC104576.1-201ENST00000524225 88 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 SCOCP1-201ENST00000554676 349 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL133241.1-201ENST00000556832 487 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL670379.2-201ENST00000604983 252 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL136221.1-201ENST00000621449 509 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 MTND4P23-201ENST00000447723 1363 ntBASIC1.58□□□□□ -2.16
TMX2-CTNND1H3BSU7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU4-15P-201ENST00000362613 141 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-655P-201ENST00000362858 107 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1210P-201ENST00000363775 107 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-944P-201ENST00000364023 107 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 Y_RNA.248-201ENST00000364501 109 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 Y_RNA.301-201ENST00000364990 103 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-877P-201ENST00000383868 107 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU1-148P-201ENST00000384472 162 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1274P-201ENST00000384557 107 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 Y_RNA.530-201ENST00000384587 101 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms