Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 AC116337.1-201ENST00000509680 687 ntBASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 RNU6-567P-201ENST00000516746 107 ntBASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 AC118273.2-201ENST00000532092 465 ntBASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 AC022616.8-201ENST00000533569 253 ntBASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 AC233702.2-202ENST00000562547 291 ntBASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 AC090517.1-201ENST00000569307 266 ntBASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 uc_338.5-201ENST00000611839 155 ntBASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 AL590808.1-201ENST00000618696 141 ntBASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.95□□□□□ -2.1
NKX6-3A6NJ46 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 SNORA72.1-201ENST00000363485 129 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 SNORD32B-201ENST00000364460 84 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 RNU6-842P-201ENST00000384269 107 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 RNU6-601P-201ENST00000384540 107 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 Y_RNA.533-201ENST00000384596 114 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 RNA5SP201-201ENST00000410316 124 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 RNU2-48P-201ENST00000410694 191 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 RNU2-41P-201ENST00000410991 178 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 RNA5SP270-201ENST00000411361 118 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 EDDM3CP-201ENST00000415977 425 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AL445305.1-201ENST00000432577 575 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AC079354.2-201ENST00000453523 154 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 RPL23AP75-201ENST00000491601 451 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AC091544.4-201ENST00000555268 342 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 MIR3945-201ENST00000581853 98 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AL031274.2-201ENST00000599419 203 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AC013412.1-201ENST00000610687 192 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AC009318.2-201ENST00000610917 651 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 MIR6132-201ENST00000622083 109 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 TPTEP1-208ENST00000636884 213 ntBASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.94□□□□□ -2.1
NKX6-3A6NJ46 ZNF720P1-201ENST00000562403 1939 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 MTND5P9-201ENST00000503854 1755 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 MIRLET7G-201ENST00000362280 84 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 Y_RNA.2-201ENST00000362330 96 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 RNA5SP289-201ENST00000362332 137 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 Y_RNA.88-201ENST00000363029 99 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 RNU5B-2P-201ENST00000363036 113 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 SNORA18.2-201ENST00000383865 132 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AL356432.1-201ENST00000405809 419 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 RNU4-14P-201ENST00000410858 122 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 RNA5SP508-201ENST00000411327 119 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AC027124.2-201ENST00000428249 105 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 CBX3P6-201ENST00000430257 527 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 RPS15AP28-201ENST00000435088 386 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AL513124.1-201ENST00000450410 614 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 MTND3P10-201ENST00000450967 341 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 PRELID3BP1-201ENST00000457142 540 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 RPL7P42-201ENST00000481005 679 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 RNU7-193P-201ENST00000516723 65 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 RNU6-1213P-201ENST00000517075 94 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 EIF4A1P12-201ENST00000551910 141 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 MIR5007-201ENST00000583098 95 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AC002984.1-201ENST00000591692 448 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AL158827.2-201ENST00000602494 330 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AL355073.2-201ENST00000612106 557 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AL132822.1-201ENST00000617063 513 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AC022306.2-201ENST00000617563 647 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AL691447.3-201ENST00000635020 330 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 KPNA2P1-201ENST00000458289 1591 ntBASIC1.93□□□□□ -2.1
NKX6-3A6NJ46 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 MIR21-201ENST00000362134 72 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 Y_RNA.339-201ENST00000365325 102 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 RNU6-26P-201ENST00000383985 107 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 MIR32-201ENST00000384965 70 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 Y_RNA.594-201ENST00000410373 140 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 RNU6-1050P-201ENST00000410388 107 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 ANXA2P1-201ENST00000505539 926 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AC026782.1-201ENST00000512952 449 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms