Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AL512310.8-201ENST00000550183 120 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 SNORA59B-202ENST00000578183 701 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AC090616.2-202ENST00000584248 222 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AP001596.2-201ENST00000608410 312 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AP001506.1-201ENST00000615444 211 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AC009033.1-201ENST00000624279 431 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 MIR337-201ENST00000362281 93 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 RNU6-562P-201ENST00000362731 107 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 SNORA72.2-201ENST00000365028 127 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 Y_RNA.399-201ENST00000383955 105 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 MIR300-201ENST00000401138 83 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 RNU6-195P-201ENST00000411352 109 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 HMGN1P14-201ENST00000412459 517 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 AC004965.1-201ENST00000413033 213 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 MRPL35P3-201ENST00000421557 364 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 AC060773.1-201ENST00000421698 310 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 AC012306.1-201ENST00000423267 114 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 SNX2P2-201ENST00000424553 323 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 ISCA1P6-201ENST00000427740 390 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 RPL31P35-201ENST00000431058 377 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 AL603825.1-201ENST00000438481 80 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 AL133217.1-201ENST00000450980 425 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 AC004223.1-201ENST00000479840 271 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 AC011406.1-201ENST00000512440 370 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 AGGF1P4-201ENST00000568249 801 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 MIR4421-201ENST00000578133 69 ntBASIC0.91□□□□□ -2.26
RBFOX3A6NFN3 RNU6-534P-201ENST00000364877 106 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 SNORA36A-201ENST00000384221 132 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 MIR513A1-201ENST00000385138 129 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AC022364.2-201ENST00000457963 554 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 RNA5SP384-201ENST00000516615 116 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AC069113.1-201ENST00000517763 267 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 MIR4498-201ENST00000577599 66 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 NIFKP6-201ENST00000598115 845 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AC011458.1-201ENST00000604034 617 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 MIR98-201ENST00000606724 119 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 MIR6078-201ENST00000611069 100 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AC126177.8-201ENST00000618339 1015 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 AL353770.2-201ENST00000620024 78 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 MIR8065-201ENST00000620577 100 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 MIR338-201ENST00000636369 67 ntBASIC0.9□□□□□ -2.27
RBFOX3A6NFN3 BX322639.1-202ENST00000423987 2213 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 RNU6-331P-201ENST00000384724 107 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 SNORA40.6-201ENST00000391153 128 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 COX6CP10-201ENST00000416832 224 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 USP9YP14-201ENST00000430663 563 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AL033528.1-201ENST00000453780 140 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 MTND1P22-201ENST00000510572 951 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 TRMT112P2-201ENST00000512910 132 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AC016256.1-201ENST00000547971 354 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 MIR4709-201ENST00000577272 72 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 MZT1P2-201ENST00000604387 248 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AL365434.2-201ENST00000607979 234 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AC068787.1-201ENST00000623908 691 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AL359697.1-201ENST00000624879 587 ntBASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.89□□□□□ -2.27
RBFOX3A6NFN3 RNU6-545P-201ENST00000362681 104 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 RNU1-22P-201ENST00000363334 158 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 RNU6-606P-201ENST00000384721 111 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AL031577.2-201ENST00000404133 280 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 MIR1283-1-201ENST00000408494 87 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AC073910.1-201ENST00000445047 438 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 SCARNA18-201ENST00000459004 134 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AL163195.1-201ENST00000496941 348 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AC010486.2-201ENST00000505572 483 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 SNORD116-28-201ENST00000516123 91 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 RNA5SP404-201ENST00000517118 132 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms