Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 Y_RNA.451-201ENST00000384200 100 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.524-201ENST00000384564 100 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.561-201ENST00000384694 100 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 MIR181B1-201ENST00000385240 110 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 SNORA12.2-201ENST00000391040 156 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 AL590004.1-201ENST00000405321 300 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 MIR1289-2-201ENST00000408360 111 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 RN7SKP192-201ENST00000411291 327 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 HMGN2P35-201ENST00000412164 270 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 AC012306.1-201ENST00000423267 114 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 AC018865.2-201ENST00000423631 129 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 EIF4EP4-201ENST00000424916 578 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 AC008267.5-201ENST00000424928 265 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 MTCO3P29-201ENST00000432119 779 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 MICF-203ENST00000432679 129 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 AL603825.1-201ENST00000438481 80 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 RPS27AP9-201ENST00000477681 438 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 AF186996.7-201ENST00000492781 209 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.711-201ENST00000516993 102 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 COX6CP5-201ENST00000527162 228 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 AP003072.1-201ENST00000531740 145 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 MIR3199-1-201ENST00000582434 88 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 RMST_6.1-201ENST00000611980 203 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 MIR1244-1-201ENST00000612829 85 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 MIR1244-3-201ENST00000635744 85 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 MIR1244-2-201ENST00000636449 85 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 MIR1244-4-202ENST00000636813 85 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 AL450472.1-202ENST00000637286 180 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 SNORD115-32-201ENST00000364079 82 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 SNORD56.5-201ENST00000364281 72 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 SNORD114-30-201ENST00000364448 72 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 MIR32-201ENST00000384965 70 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 MIR218-1-201ENST00000384999 110 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 CBX3P9-201ENST00000402326 552 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 RNU4-53P-201ENST00000410828 140 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 MRPS18CP6-201ENST00000423587 223 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 AC112220.1-201ENST00000434628 355 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 Z82188.1-201ENST00000436709 154 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 AC073901.1-201ENST00000462471 408 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 AL163540.1-201ENST00000485382 386 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 SCARNA3-201ENST00000517097 143 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 RN7SKP295-201ENST00000517264 153 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 AC026241.1-201ENST00000517873 2142 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 IGKV3-31-201ENST00000523109 329 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 ELOCP31-201ENST00000540463 467 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 MIR3923-201ENST00000579521 83 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 ZNF861P-201ENST00000588126 639 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 RPL30P11-203ENST00000598995 310 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.812-201ENST00000610788 101 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.784-201ENST00000613803 101 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 AC083806.3-201ENST00000614016 455 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.787-201ENST00000616522 101 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.780-201ENST00000617336 101 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.801-201ENST00000619005 101 ntBASIC2.94□□□□□ -1.94
TRIM43BA6NCK2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.28-201ENST00000362554 111 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.31-201ENST00000362574 102 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 RNU1-115P-201ENST00000365329 160 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 MIR512-1-201ENST00000384913 84 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 MIR153-2-201ENST00000385225 87 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 MIR190B-201ENST00000401119 79 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 RNU6-1328P-201ENST00000410938 106 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 PMCHL1-202ENST00000423102 261 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AL590556.1-201ENST00000423231 483 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 RPL30P4-201ENST00000429309 333 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AL591806.2-201ENST00000433122 173 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 snoU13.6-201ENST00000458785 104 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 TOMM22P6-201ENST00000465035 409 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AC140059.1-201ENST00000489238 361 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AC144568.1-201ENST00000520139 137 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 CYP4A27P-201ENST00000567218 190 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AC010928.2-201ENST00000588017 287 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AL078605.1-201ENST00000603529 500 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AC025754.2-201ENST00000606491 432 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AC006157.1-201ENST00000611750 366 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms