Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AC007395.1-201ENST00000451333 677 ntBASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 TPT1P7-201ENST00000458300 517 ntBASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 SNORA31.10-201ENST00000516482 106 ntBASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 RNA5SP268-201ENST00000516828 124 ntBASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 AC021231.3-201ENST00000558497 370 ntBASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 AL096861.1-201ENST00000610899 123 ntBASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 MIR338-201ENST00000636369 67 ntBASIC-0.67□□□□□ -2.52
TRAV21A0A0B4J279 SNORA12-201ENST00000391162 147 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 RNU6-57P-201ENST00000411348 103 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 AC010154.1-201ENST00000425857 269 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 HMGN2P22-201ENST00000427588 175 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 STAG3L5P-204ENST00000443759 179 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 AC016925.1-201ENST00000458303 298 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 RNU6-917P-201ENST00000516294 104 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 AK6P2-201ENST00000549020 471 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 AC234772.3-201ENST00000602277 528 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 AC007014.2-201ENST00000615581 479 ntBASIC-0.68□□□□□ -2.52
TRAV21A0A0B4J279 RNU6-839P-201ENST00000363347 108 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 RNU6-679P-201ENST00000391003 106 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 RNA5SP109-201ENST00000391010 116 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 MTCO2P31-201ENST00000402702 684 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 SNORD111-201ENST00000408139 94 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 MIR548H2-201ENST00000408874 88 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 BX119904.4-201ENST00000424402 301 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 AC093019.1-201ENST00000443135 252 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 LINC01399-202ENST00000458450 244 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 RNU7-56P-201ENST00000458744 62 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 snoU13.21-201ENST00000459368 105 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 HMGN2P26-201ENST00000463169 339 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 RNA5SP480-201ENST00000516840 109 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 AC023538.1-201ENST00000534576 736 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 MIR3612-201ENST00000579753 87 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 AC091135.1-201ENST00000585943 307 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 AL592221.1-201ENST00000605266 382 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 AC018889.1-201ENST00000605372 397 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 uc_338.16-201ENST00000621804 95 ntBASIC-0.69□□□□□ -2.52
TRAV21A0A0B4J279 RNU6-654P-201ENST00000364373 107 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 RNU6-923P-201ENST00000364753 107 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 SNORD31B-201ENST00000364977 69 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 SNORA2.2-201ENST00000365473 135 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 RNU6-127P-201ENST00000390897 107 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 PCNPP3-201ENST00000393579 471 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 MIR892B-201ENST00000401279 77 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 SNORD83.1-201ENST00000411362 77 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 MTND4LP11-201ENST00000422184 280 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 RPL39P6-201ENST00000448289 150 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 AC114811.1-201ENST00000507207 168 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 MIR4300-201ENST00000581016 96 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 MIR4637-201ENST00000582405 84 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 AL136363.2-201ENST00000604173 851 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.7□□□□□ -2.52
TRAV21A0A0B4J279 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 RNU6-114P-201ENST00000384704 105 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 MIR196A2-201ENST00000385189 110 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 MTCO2P7-201ENST00000446518 666 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 MRPL42P4-201ENST00000453267 443 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 RNU7-159P-201ENST00000459284 62 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 RNU6-143P-201ENST00000516942 93 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 AC036111.3-201ENST00000526389 112 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 AP003716.2-201ENST00000528260 108 ntBASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.71□□□□□ -2.52
TRAV21A0A0B4J279 MIR1-1-201ENST00000362147 71 ntBASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 SNORA33-201ENST00000363664 130 ntBASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 SNORD114-12-201ENST00000365400 75 ntBASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 SNORD116-20-201ENST00000384529 92 ntBASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 RNU2-59P-201ENST00000410482 191 ntBASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 ART2BP-201ENST00000453501 499 ntBASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 AC114981.1-201ENST00000503897 678 ntBASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 RNA5SP94-201ENST00000516917 108 ntBASIC-0.72□□□□□ -2.52
TRAV21A0A0B4J279 RNU4-15P-201ENST00000362613 141 ntBASIC-0.73□□□□□ -2.53
TRAV21A0A0B4J279 SNORA8.2-201ENST00000384372 139 ntBASIC-0.73□□□□□ -2.53
TRAV21A0A0B4J279 MIR7-1-201ENST00000384871 110 ntBASIC-0.73□□□□□ -2.53
TRAV21A0A0B4J279 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.73□□□□□ -2.53
TRAV21A0A0B4J279 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.73□□□□□ -2.53
TRAV21A0A0B4J279 MTCO3P17-201ENST00000443775 513 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms