Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MTCO1P17-201ENST00000411522 491 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 TIMM9P2-201ENST00000419324 266 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 TIMM9P3-201ENST00000428659 274 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 RPL31P35-201ENST00000431058 377 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 HMGN2P34-201ENST00000437647 269 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AL158053.1-201ENST00000441503 453 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AL163973.1-201ENST00000484753 577 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-863P-201ENST00000515989 104 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 RNA5SP227-201ENST00000516184 113 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-917P-201ENST00000516294 104 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AC069113.3-201ENST00000521019 150 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 MIR5708-201ENST00000579723 85 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 SNORA4-201ENST00000584302 138 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AC022217.4-201ENST00000604389 163 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 RPL17P51-201ENST00000605218 238 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 U6.42-201ENST00000618440 107 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 MIR8054-201ENST00000620877 86 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AC103706.2-201ENST00000638080 240 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-78P-201ENST00000362897 107 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-199P-201ENST00000362954 107 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 RNA5SP214-201ENST00000363378 118 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-793P-201ENST00000384233 104 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU1-139P-201ENST00000391307 165 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AC007283.2-201ENST00000424739 197 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 MTATP6P9-201ENST00000515039 680 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU2-34P-201ENST00000516534 121 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AC087883.1-201ENST00000551882 391 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AC022523.2-201ENST00000561045 150 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR3912-201ENST00000577566 105 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR4298-201ENST00000584380 73 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AC004832.4-201ENST00000608952 331 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AL096861.1-201ENST00000610899 123 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AL136317.1-201ENST00000612653 226 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AC008133.2-201ENST00000624540 351 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 AC027514.1-201ENST00000588561 1603 ntBASIC-0.16□□□□□ -2.44
TRAV1-2A0A0B4J238 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-302P-201ENST00000365249 107 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 SNORA2.2-201ENST00000365473 135 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-815P-201ENST00000384080 113 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 MTCO1P27-201ENST00000448269 226 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 AL049829.1-201ENST00000465411 156 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 OR9P1P-201ENST00000496431 281 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 AC022868.1-201ENST00000517767 391 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 AC016957.1-201ENST00000534895 309 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 AC023827.1-201ENST00000569247 97 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR8084-201ENST00000614105 89 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 AL157786.1-207ENST00000627771 695 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 U6.108-201ENST00000637764 58 ntBASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
TRAV1-2A0A0B4J238 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR520F-201ENST00000384824 87 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 SNORD105-201ENST00000386910 85 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 RNA5SP323-201ENST00000391094 133 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 RNA5SP467-201ENST00000391274 118 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU4-22P-201ENST00000411058 166 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 MTCO3P10-201ENST00000455912 772 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 MTCO2P18-201ENST00000457151 658 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR4778-201ENST00000577635 80 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 OR4H6P-202ENST00000603819 340 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AL031775.1-201ENST00000607014 887 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 SEPT14P17-201ENST00000617978 177 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AC026585.1-201ENST00000619582 524 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AL078595.3-201ENST00000623815 1166 ntBASIC-0.18□□□□□ -2.44
TRAV1-2A0A0B4J238 AL390237.1-201ENST00000404226 1415 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-545P-201ENST00000362681 104 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-946P-201ENST00000383878 107 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR598-201ENST00000384868 97 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-440P-201ENST00000390882 105 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AL590135.1-201ENST00000422215 156 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms