Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC109446.2-201ENST00000567872 497 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC090517.1-201ENST00000569307 266 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC068790.6-201ENST00000602558 258 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AL929325.1-201ENST00000603096 117 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-6P-201ENST00000606623 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 BX322639.1-202ENST00000423987 2213 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC018630.2-201ENST00000534866 2403 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-545P-201ENST00000362681 104 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 SNORD32A-201ENST00000364805 84 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-336P-201ENST00000364891 107 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-61P-201ENST00000365528 109 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-641P-201ENST00000384006 107 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 SNORA26.3-201ENST00000391119 136 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 MTCYBP36-201ENST00000404146 440 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC073614.1-201ENST00000438690 650 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC092991.1-201ENST00000477176 376 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-237P-201ENST00000515985 71 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 SNORD79.1-201ENST00000516069 84 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC008015.1-201ENST00000555505 465 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 TPRKBP2-201ENST00000565969 475 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC133485.1-201ENST00000567176 124 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC138907.6-201ENST00000568401 126 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 TMF1P1-201ENST00000576058 373 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC016727.1-205ENST00000605437 569 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC097478.2-201ENST00000610572 514 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AP000484.1-201ENST00000620067 1252 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 AC019226.2-201ENST00000625973 424 ntBASIC0.48□□□□□ -2.33
TMEM56-RWDD3S4R434 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AC092268.1-201ENST00000342691 405 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-552P-201ENST00000362869 119 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-17P-201ENST00000384245 107 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-110P-201ENST00000384508 104 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-18P-201ENST00000384527 107 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR508-201ENST00000384857 115 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR558-201ENST00000384920 94 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 RPL21P1-201ENST00000399532 476 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR942-201ENST00000401111 86 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AC007283.2-201ENST00000424739 197 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 MED13P1-201ENST00000428342 171 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AC119618.1-201ENST00000434191 222 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 RPS24P1-201ENST00000438550 371 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 GAPDHP17-201ENST00000449858 1001 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 MTCYBP1-201ENST00000454315 1119 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AC112206.4-201ENST00000515142 405 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 RNA5SP102-201ENST00000516865 106 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR5695-201ENST00000579717 85 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AC016727.2-201ENST00000603988 621 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AC064872.1-201ENST00000604823 1072 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AC009509.4-201ENST00000619202 509 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 AC013437.2-201ENST00000639587 677 ntBASIC0.47□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-428P-201ENST00000362942 107 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU4-1-201ENST00000363925 141 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 Y_RNA.302-201ENST00000364997 102 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 Y_RNA.324-201ENST00000365165 102 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 Y_RNA.363-201ENST00000365529 113 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 RNA5SP109-201ENST00000391010 116 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AL133396.1-201ENST00000432048 687 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 RPL37P21-201ENST00000435890 276 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AC245047.7-201ENST00000440265 293 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 Z73417.1-201ENST00000447373 778 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AC010587.1-201ENST00000505809 469 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU2-34P-201ENST00000516534 121 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU6-922P-201ENST00000516753 99 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU6-685P-201ENST00000517088 95 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AP003484.1-201ENST00000530974 250 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 CYP4A27P-201ENST00000567218 190 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 Z98751.3-201ENST00000604447 521 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AC104465.1-201ENST00000611365 139 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 MIR6767-201ENST00000637302 66 ntBASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
TMEM56-RWDD3S4R434 AL391994.1-201ENST00000254724 282 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 snoU2-30.2-201ENST00000362805 70 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU5E-10P-201ENST00000363506 118 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU4-68P-201ENST00000364314 141 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU4-12P-201ENST00000365233 139 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU6-1000P-201ENST00000391066 106 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 AF228730.1-201ENST00000397972 663 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 AC010154.1-201ENST00000425857 269 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 CETN4P-201ENST00000432407 469 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 HSFY7P-201ENST00000432672 318 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 AC002486.1-201ENST00000435098 391 ntBASIC0.45□□□□□ -2.34
TMEM56-RWDD3S4R434 HSFY8P-201ENST00000437934 318 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 243.1 ms