Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 SNORA16.2-201ENST00000390991 127 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 SNORA26.8-201ENST00000391306 124 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 MTND2P9-201ENST00000422293 931 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 CST2P1-201ENST00000425770 87 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 RPS6P15-201ENST00000431996 751 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC027119.1-201ENST00000440877 241 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC132479.1-201ENST00000449160 144 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 RPS29P15-201ENST00000458329 171 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 SCARNA18-201ENST00000459004 134 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 RNU7-167P-201ENST00000459160 62 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 RNU6-445P-201ENST00000516949 107 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 SUMO2P18-201ENST00000518873 252 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AL137161.1-201ENST00000532231 390 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 RAB11AP2-201ENST00000545905 639 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 HMGB1P33-201ENST00000563485 527 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC109446.1-201ENST00000566172 220 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 CYP4A27P-201ENST00000567218 190 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC107304.1-201ENST00000604229 296 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC016727.1-205ENST00000605437 569 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC100821.1-201ENST00000523153 2479 ntBASIC1.24□□□□□ -2.21
COMMD3-BMI1R4GMX3 U8.1-201ENST00000362843 134 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 RNU6-517P-201ENST00000384362 110 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 RNU6-692P-201ENST00000384496 107 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 RNA5SP213-201ENST00000391031 106 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 RNU6-174P-201ENST00000410406 106 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 MTCO1P21-201ENST00000416634 589 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 SNRPEP8-201ENST00000442866 260 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC244505.5-201ENST00000443639 207 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 MTND1P27-201ENST00000451117 902 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 RPS27AP8-201ENST00000452665 445 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 SNRPFP3-201ENST00000457792 225 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC008628.2-201ENST00000502605 298 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 AK3P2-201ENST00000507976 429 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 MIR3937-201ENST00000580135 106 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC064807.4-201ENST00000607201 407 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 U2.17-201ENST00000611454 95 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 AL359697.1-201ENST00000624879 587 ntBASIC1.23□□□□□ -2.21
COMMD3-BMI1R4GMX3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 RNU6-266P-201ENST00000364225 107 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 SNORD31B-201ENST00000364977 69 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 MIR520A-201ENST00000384862 85 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AP000275.1-201ENST00000411943 390 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 RPL37P10-201ENST00000412884 288 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 C8orf59P1-201ENST00000429930 303 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AL445567.1-201ENST00000439121 144 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 C1DP4-201ENST00000455429 424 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC007547.1-201ENST00000462177 490 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC108729.3-201ENST00000513484 108 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 MTCO2P4-201ENST00000517968 247 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AP001836.1-201ENST00000604675 523 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 AC091931.1-201ENST00000623488 728 ntBASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
COMMD3-BMI1R4GMX3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 MIR378A-201ENST00000362177 66 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 RNU6-428P-201ENST00000362942 107 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 Y_RNA.201-201ENST00000364052 96 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 RNU6-282P-201ENST00000365357 103 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 RNU6-203P-201ENST00000384038 104 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 SNORA32.2-201ENST00000384049 122 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 CDK8P2-201ENST00000415020 547 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 BX295541.1-201ENST00000417774 250 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 AC108667.1-201ENST00000428618 249 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 HSPE1P9-201ENST00000440046 311 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 MTCO2P3-201ENST00000442543 421 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 AC007395.1-201ENST00000451333 677 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 SNORA31.16-201ENST00000516773 139 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 AGGF1P4-201ENST00000568249 801 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 AL391840.1-201ENST00000571144 367 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 MTATP6P24-201ENST00000576835 677 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 AC012507.3-201ENST00000603556 477 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.21□□□□□ -2.22
COMMD3-BMI1R4GMX3 RNU6-552P-201ENST00000362869 119 ntBASIC1.2□□□□□ -2.22
COMMD3-BMI1R4GMX3 RNU1-76P-201ENST00000362903 159 ntBASIC1.2□□□□□ -2.22
COMMD3-BMI1R4GMX3 RNU5A-6P-201ENST00000384136 116 ntBASIC1.2□□□□□ -2.22
COMMD3-BMI1R4GMX3 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
COMMD3-BMI1R4GMX3 RNU2-7P-201ENST00000410794 178 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms