Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TMF1P1-201ENST00000576058 373 ntBASIC0.53□□□□□ -2.32
SCN10AQ9Y5Y9 DEFB131E-202ENST00000602581 683 ntBASIC0.53□□□□□ -2.32
SCN10AQ9Y5Y9 AL034555.1-201ENST00000604816 211 ntBASIC0.53□□□□□ -2.32
SCN10AQ9Y5Y9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SCN10AQ9Y5Y9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-1123P-201ENST00000362347 106 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-105P-201ENST00000363909 104 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-371P-201ENST00000364283 108 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC010099.3-201ENST00000423896 409 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 MTND3P5-201ENST00000512798 333 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 RNA5SP255-201ENST00000516370 107 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 APOOP3-201ENST00000536787 586 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC097478.2-201ENST00000610572 514 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 RMST_7.1-201ENST00000621935 268 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 MIR6759-201ENST00000638110 65 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 U4.7-201ENST00000638126 106 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 Y_RNA.280-201ENST00000364765 112 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-384P-201ENST00000364900 104 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 SNORA12.2-201ENST00000391040 156 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 RNA5SP127-201ENST00000411051 133 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC006461.1-201ENST00000412637 326 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC007547.1-201ENST00000462177 490 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC145146.1-201ENST00000496370 254 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC116353.3-201ENST00000511215 249 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC023050.2-201ENST00000544968 387 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC021231.3-201ENST00000558497 370 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 MIR3923-201ENST00000579521 83 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC008752.3-201ENST00000588113 712 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 AC063943.3-201ENST00000615562 356 ntBASIC0.52□□□□□ -2.33
SCN10AQ9Y5Y9 MTND4P12-201ENST00000498999 1377 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AC092268.1-201ENST00000342691 405 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 Y_RNA.518-201ENST00000384552 113 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 RPS20P2-201ENST00000402520 389 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AC114482.1-201ENST00000418010 247 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AC060773.1-201ENST00000421698 310 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AL162395.1-201ENST00000457882 422 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AC010531.2-201ENST00000465012 153 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-1003P-201ENST00000517099 105 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 SNORA70.22-201ENST00000517160 124 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AC087883.1-201ENST00000551882 391 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 MIR4709-201ENST00000577272 72 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 GHRLOS.1-201ENST00000610995 70 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 AL445523.1-201ENST00000451184 1362 ntBASIC0.51□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-505P-201ENST00000384427 107 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-35P-201ENST00000384530 107 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-1179P-201ENST00000384667 107 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 RPS3AP37-201ENST00000419176 745 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 HSPE1P23-201ENST00000509838 286 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 ACA64.5-201ENST00000516207 127 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-567P-201ENST00000516746 107 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AC010620.1-201ENST00000601088 1102 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AL356157.2-201ENST00000605122 111 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 RPL17P51-201ENST00000605218 238 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 U3.4-201ENST00000363352 213 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 Y_RNA.471-201ENST00000384312 102 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 EEF1A1P40-201ENST00000412883 573 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AC063976.4-201ENST00000421971 163 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AC073614.1-201ENST00000438690 650 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AC011406.1-201ENST00000512440 370 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 RNA5SP168-201ENST00000516642 112 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AL121579.1-201ENST00000555129 305 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AC005520.5-201ENST00000613926 164 ntBASIC0.5□□□□□ -2.33
SCN10AQ9Y5Y9 AL391994.1-201ENST00000254724 282 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-534P-201ENST00000364877 106 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 MIR548B-201ENST00000385247 97 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 AL031779.1-201ENST00000415663 330 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 AC078809.1-201ENST00000427601 140 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 SNRPEP8-201ENST00000442866 260 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 AC048334.1-201ENST00000477975 159 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 RAP1BP2-201ENST00000478270 544 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 COX6CP6-201ENST00000490840 228 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 AC004817.2-201ENST00000561794 651 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 AC023932.2-201ENST00000603176 175 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 AL513534.2-201ENST00000603836 250 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 AP002782.1-201ENST00000623107 614 ntBASIC0.49□□□□□ -2.33
SCN10AQ9Y5Y9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 RNU2-72P-201ENST00000411175 163 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 HIGD1AP15-201ENST00000416198 280 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 MTND1P32-201ENST00000433043 938 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC090888.2-201ENST00000559765 1144 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC008088.1-201ENST00000580993 280 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 MIR338-201ENST00000636369 67 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms