Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HRH3Q9Y5N1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HRH3Q9Y5N1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HRH3Q9Y5N1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HRH3Q9Y5N1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.04□□□□□ -1.76
HRH3Q9Y5N1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.04□□□□□ -1.76
HRH3Q9Y5N1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 MIR331-201ENST00000362302 94 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 RNU6-198P-201ENST00000384258 104 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 MIR3074-201ENST00000384885 81 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 MIR513A2-201ENST00000385249 127 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 MIR548A3-201ENST00000385297 97 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 RNU6-750P-201ENST00000390946 107 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 SNORA12-201ENST00000391162 147 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 SDHCP2-201ENST00000398565 501 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 MIR300-201ENST00000401138 83 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 RN7SL98P-201ENST00000462271 300 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 AC015795.1-201ENST00000513669 327 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 SNORA31.9-201ENST00000516429 84 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 MIR4753-201ENST00000585119 83 ntBASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HRH3Q9Y5N1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HRH3Q9Y5N1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 U8.1-201ENST00000362843 134 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 RNA5SP307-201ENST00000362863 116 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 RNU1-132P-201ENST00000364300 164 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 SNORA20B-201ENST00000384220 132 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 RNU6-136P-201ENST00000384663 107 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 RN7SKP101-201ENST00000411376 320 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 HMGN2P9-201ENST00000476875 229 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 AL592156.1-201ENST00000508758 304 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 AC008739.2-201ENST00000597006 317 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 AL020997.2-201ENST00000602607 184 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 AC112484.5-201ENST00000624189 228 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 RNA5SP196-201ENST00000625967 102 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 MIR4679-1-201ENST00000637619 75 ntBASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.02□□□□□ -1.77
HRH3Q9Y5N1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 SNORA27.1-201ENST00000362604 124 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 RNU6-674P-201ENST00000363831 107 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 RNU4-13P-201ENST00000364019 141 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 RNA5SP366-201ENST00000365454 123 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 SNORD116-13-201ENST00000384408 92 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 SNORD116-21-201ENST00000384507 92 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 PHBP16-201ENST00000446318 950 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 RNU7-57P-201ENST00000459540 60 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AC010598.1-201ENST00000510378 103 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AC100770.1-201ENST00000532310 322 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AL160236.1-201ENST00000556317 195 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AC022655.2-201ENST00000577280 318 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 MIR1254-2-201ENST00000579553 63 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AL121890.5-201ENST00000620848 304 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AC091905.2-201ENST00000623143 306 ntBASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HRH3Q9Y5N1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HRH3Q9Y5N1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HRH3Q9Y5N1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HRH3Q9Y5N1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HRH3Q9Y5N1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 RNA5SP388-201ENST00000362584 119 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 SNORA70C-201ENST00000384538 135 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 MIR29B2-201ENST00000385055 81 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 SNORA57.1-201ENST00000391227 145 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 AL355796.1-201ENST00000406706 323 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 MIR1278-201ENST00000408753 81 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 AL135786.1-201ENST00000415892 214 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 AC063976.4-201ENST00000421971 163 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 AL353705.1-201ENST00000433468 480 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 RPS26P55-201ENST00000471178 356 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 RNU6-168P-201ENST00000516189 101 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 IGLV3-26-201ENST00000520756 302 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 MRPL49P2-201ENST00000521066 465 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms