Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.54□□□□□ -2
CLDN16Q9Y5I7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.54□□□□□ -2
CLDN16Q9Y5I7 CYP4A27P-201ENST00000567218 190 ntBASIC2.54□□□□□ -2
CLDN16Q9Y5I7 AL080274.1-201ENST00000605565 220 ntBASIC2.54□□□□□ -2
CLDN16Q9Y5I7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.54□□□□□ -2
CLDN16Q9Y5I7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.54□□□□□ -2
CLDN16Q9Y5I7 AC137590.2-201ENST00000619709 240 ntBASIC2.54□□□□□ -2
CLDN16Q9Y5I7 SCARNA4-201ENST00000629045 128 ntBASIC2.54□□□□□ -2
CLDN16Q9Y5I7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.54□□□□□ -2
CLDN16Q9Y5I7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN16Q9Y5I7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CLDN16Q9Y5I7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN16Q9Y5I7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 AC069528.2-201ENST00000624849 1991 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 Y_RNA.197-201ENST00000364004 102 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 RNU6-220P-201ENST00000390919 107 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 RNU2-52P-201ENST00000410680 190 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 RNU2-63P-201ENST00000410792 194 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 MTCYBP10-201ENST00000424905 650 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 MTND1P14-201ENST00000427400 950 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 SNORA9.3-201ENST00000516383 129 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 Y_RNA.701-201ENST00000516812 110 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 RNU6-699P-201ENST00000517081 110 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 RNU6-586P-201ENST00000517265 104 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 HSPE1P18-201ENST00000517602 280 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 AC004584.2-201ENST00000570407 410 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 MIR4319-201ENST00000577285 85 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 AC010928.2-201ENST00000588017 287 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 AC100812.1-201ENST00000607622 580 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 MIR1244-1-201ENST00000612829 85 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 MIR6733-201ENST00000635723 61 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 MIR1244-3-201ENST00000635744 85 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 MIR1244-2-201ENST00000636449 85 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 MIR1244-4-202ENST00000636813 85 ntBASIC2.53□□□□□ -2
CLDN16Q9Y5I7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLDN16Q9Y5I7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 RNU4-15P-201ENST00000362613 141 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.314-201ENST00000365114 102 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.394-201ENST00000383942 103 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-541P-201ENST00000384709 110 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 MIR29B2-201ENST00000385055 81 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 SNORA12.2-201ENST00000391040 156 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 MTCYBP2-201ENST00000407745 171 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 GSTA11P-201ENST00000452866 669 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 CYP2C59P-201ENST00000457790 269 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 RNU7-87P-201ENST00000459343 62 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 RPL30P10-201ENST00000488148 337 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-1153P-201ENST00000516760 105 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 AC008121.3-201ENST00000618726 433 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 MIR203B-201ENST00000636080 86 ntBASIC2.52□□□□□ -2.01
CLDN16Q9Y5I7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.428-201ENST00000384078 102 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 RNU1-138P-201ENST00000384093 164 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.445-201ENST00000384168 102 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 MIR559-201ENST00000385188 96 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 MIR153-2-201ENST00000385225 87 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-1156P-201ENST00000410365 100 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 AC007677.1-201ENST00000445757 515 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 RPS27AP9-201ENST00000477681 438 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 AC105758.1-201ENST00000506038 399 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-976P-201ENST00000516086 111 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 RNA5SP76-201ENST00000516277 87 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-826P-201ENST00000516827 104 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 AP000889.1-201ENST00000530968 660 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 SUB1P3-201ENST00000564581 315 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 AC104581.2-201ENST00000572227 430 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 AC023043.3-201ENST00000593113 385 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 AC044792.1-201ENST00000593294 196 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 AL713866.2-201ENST00000603579 219 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 RMST_6.1-201ENST00000611980 203 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms