Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL590135.1-201ENST00000422215 156 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AC019205.3-201ENST00000424573 156 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AL353689.1-201ENST00000438895 199 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AC016700.2-201ENST00000446011 156 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AMD1P1-201ENST00000457220 922 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 RPS29P27-201ENST00000463711 170 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AC015911.1-201ENST00000495111 156 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 FAM206BP-201ENST00000510179 541 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AC091874.1-201ENST00000511402 339 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 PTP4A1P4-201ENST00000512479 322 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AC025465.4-201ENST00000513422 638 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 RNA5SP182-201ENST00000516064 82 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 Y_RNA.673-201ENST00000516306 88 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AC068944.2-201ENST00000610373 403 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AC022202.1-201ENST00000613515 211 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 ZNF702P-202ENST00000434269 1966 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU6-227P-201ENST00000362865 103 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU6-128P-201ENST00000383976 107 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 SNORD14D-201ENST00000384390 87 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 RNA5SP212-201ENST00000391223 107 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 RNA5SP118-201ENST00000410385 109 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 VN1R36P-201ENST00000414936 291 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 ZNF885P-201ENST00000420174 1098 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 IFNA20P-201ENST00000436840 528 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 PMCHL2-203ENST00000457791 237 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU7-66P-201ENST00000459469 62 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 AC007547.1-201ENST00000462177 490 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 TRBVA-201ENST00000498804 316 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 MRPS17P9-201ENST00000511924 393 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 SNORA31.16-201ENST00000516773 139 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 AC026371.1-201ENST00000551867 419 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 AL450472.1-202ENST00000637286 180 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PCDHGA1Q9Y5H4 CENPCP1-201ENST00000533085 2578 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU6-1317P-201ENST00000364582 104 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 MIR583-201ENST00000384846 75 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 BTF3L4P2-201ENST00000392798 346 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 EIF1P1-201ENST00000421436 341 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 MTND1P4-201ENST00000435196 415 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 RPL23AP6-201ENST00000446637 472 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 U8.21-201ENST00000459536 136 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 AC092989.1-201ENST00000481235 277 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 MTCYBP18-201ENST00000501056 747 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU6-718P-201ENST00000516166 105 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU6-567P-201ENST00000516746 107 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 CPDP1-201ENST00000579660 283 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 AL078605.1-201ENST00000603529 500 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 AC005296.1-201ENST00000616145 209 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 SNORA43.4-201ENST00000629559 138 ntBASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
PCDHGA1Q9Y5H4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 Y_RNA.504-201ENST00000384481 104 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AL356432.1-201ENST00000405809 419 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 MTCYBP2-201ENST00000407745 171 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AL357139.1-201ENST00000407792 426 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 MIR1277-201ENST00000408536 78 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 RNA5SP450-201ENST00000411206 102 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AL030996.1-201ENST00000411430 235 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AL645568.3-201ENST00000433683 316 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 RPL23AP3-201ENST00000453844 468 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AC104564.1-201ENST00000493028 407 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AC145146.1-201ENST00000496370 254 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AC082651.2-201ENST00000496833 166 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AC114801.2-201ENST00000503825 781 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 MIR3923-201ENST00000579521 83 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AC027514.1-201ENST00000588561 1603 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AC243960.4-201ENST00000600532 288 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 CYP2C61P-201ENST00000604072 290 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 MIR6845-201ENST00000613182 61 ntBASIC2.04□□□□□ -2.08
PCDHGA1Q9Y5H4 AC007014.2-201ENST00000615581 479 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms