Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SNORA31.16-201ENST00000516773 139 ntBASIC2.35□□□□□ -2.03
YIPF1Q9Y548 AC115990.1-201ENST00000526957 301 ntBASIC2.35□□□□□ -2.03
YIPF1Q9Y548 AC109446.1-201ENST00000566172 220 ntBASIC2.35□□□□□ -2.03
YIPF1Q9Y548 MIR4795-201ENST00000584182 89 ntBASIC2.35□□□□□ -2.03
YIPF1Q9Y548 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.35□□□□□ -2.03
YIPF1Q9Y548 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.35□□□□□ -2.03
YIPF1Q9Y548 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.35□□□□□ -2.03
YIPF1Q9Y548 MIR7843-201ENST00000622274 79 ntBASIC2.35□□□□□ -2.03
YIPF1Q9Y548 MTND4LP32-201ENST00000636111 270 ntBASIC2.35□□□□□ -2.03
YIPF1Q9Y548 AL450472.1-202ENST00000637286 180 ntBASIC2.35□□□□□ -2.03
YIPF1Q9Y548 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.35□□□□□ -2.03
YIPF1Q9Y548 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
YIPF1Q9Y548 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
YIPF1Q9Y548 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
YIPF1Q9Y548 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.34□□□□□ -2.03
YIPF1Q9Y548 Y_RNA.2-201ENST00000362330 96 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 snoU2_19.1-201ENST00000362361 80 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 Y_RNA.387-201ENST00000383918 102 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 Y_RNA.404-201ENST00000383978 102 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 RNU6-1032P-201ENST00000384100 107 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 RNU6-784P-201ENST00000384330 106 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 SNORA64-201ENST00000384674 134 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 MIR504-201ENST00000385065 83 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 MT-TD-201ENST00000387419 68 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 SNORA75.4-201ENST00000391278 119 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 RNU6-174P-201ENST00000410406 106 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.34□□□□□ -2.03
YIPF1Q9Y548 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.34□□□□□ -2.03
YIPF1Q9Y548 HMGB1P35-201ENST00000503360 598 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 AC016632.1-201ENST00000503994 196 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 Y_RNA.708-201ENST00000516950 96 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 APOOP3-201ENST00000536787 586 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 AC093249.1-201ENST00000567049 203 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 AC060766.3-201ENST00000591442 263 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 C8orf59P2-201ENST00000603441 271 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 AL078605.1-201ENST00000603529 500 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 AP000654.2-201ENST00000605633 586 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 AC104985.2-201ENST00000620598 500 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 SNORD98-201ENST00000636377 67 ntBASIC2.34□□□□□ -2.03
YIPF1Q9Y548 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
YIPF1Q9Y548 KPNA2P1-201ENST00000458289 1591 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 RNA5SP432-201ENST00000362480 116 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 RNU6-596P-201ENST00000365395 98 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 DEFA7P-201ENST00000382676 285 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 RNU6-331P-201ENST00000384724 107 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 CBX3P9-201ENST00000402326 552 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 AL591034.2-201ENST00000402839 359 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
YIPF1Q9Y548 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.33□□□□□ -2.04
YIPF1Q9Y548 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 AC079354.2-201ENST00000453523 154 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 Y_RNA.632-201ENST00000459189 102 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 AC080013.2-201ENST00000460866 323 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.33□□□□□ -2.04
YIPF1Q9Y548 AC005741.1-201ENST00000511094 432 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.33□□□□□ -2.04
YIPF1Q9Y548 Y_RNA.675-201ENST00000516389 149 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 MIR3616-201ENST00000584070 92 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 HMGB1P24-202ENST00000615653 685 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 PISRT1.1-201ENST00000616930 107 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 AL669831.3-213ENST00000636676 183 ntBASIC2.33□□□□□ -2.04
YIPF1Q9Y548 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
YIPF1Q9Y548 AP000560.1-201ENST00000624150 1937 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 MTND5P9-201ENST00000503854 1755 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 RNU6-1188P-201ENST00000363795 107 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 RNU6-142P-201ENST00000384019 107 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 RNU6-968P-201ENST00000384076 107 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 SNORA29-201ENST00000384183 140 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 Y_RNA.533-201ENST00000384596 114 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 MIR1289-2-201ENST00000408360 111 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 SNORA11.4-201ENST00000408823 129 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 EIF1AXP1-201ENST00000419267 435 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 RNA5SP384-201ENST00000516615 116 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AL356575.1-201ENST00000603008 283 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AL713866.2-201ENST00000603579 219 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AC009318.2-201ENST00000610917 651 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AC098657.3-201ENST00000620434 263 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 MIR6132-201ENST00000622083 109 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AL359697.1-201ENST00000624879 587 ntBASIC2.32□□□□□ -2.04
YIPF1Q9Y548 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
YIPF1Q9Y548 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
YIPF1Q9Y548 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms