Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 RPS26P42-201ENST00000413485 326 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 AL451074.5-201ENST00000415894 435 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 AC007098.1-201ENST00000420122 367 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 AL160004.2-201ENST00000432935 350 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 AC105272.1-201ENST00000438604 198 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 RPL31P41-201ENST00000477967 372 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 AC083906.5-201ENST00000503722 328 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 YWHAEP4-201ENST00000505390 198 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 SCARNA17.1-201ENST00000516211 143 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 RNU6-327P-201ENST00000516270 127 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 SCARNA17.2-201ENST00000516334 143 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 RNU6-911P-201ENST00000516523 104 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS4AQ9UN37 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS4AQ9UN37 RMST_6.1-201ENST00000611980 203 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 SCARNA17.4-201ENST00000614296 143 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 UCA1.1-201ENST00000620952 75 ntBASIC2.8□□□□□ -1.96
VPS4AQ9UN37 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
VPS4AQ9UN37 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
VPS4AQ9UN37 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 U8.10-201ENST00000384260 133 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 Y_RNA.504-201ENST00000384481 104 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 MIR625-201ENST00000385047 85 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 RNU6-985P-201ENST00000410182 104 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 MTCO3P29-201ENST00000432119 779 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 MICF-203ENST00000432679 129 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 GPM6BP3-201ENST00000442797 145 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC009296.1-201ENST00000443146 155 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AIG1P1-201ENST00000503376 148 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 SCGB1D5P-201ENST00000515134 247 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 RNU7-175P-201ENST00000515915 61 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 RNU5F-2P-201ENST00000516066 82 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 RNU6-1045P-201ENST00000516321 107 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 SNORA40.14-201ENST00000516543 86 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC007375.1-201ENST00000554513 578 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC105137.2-201ENST00000569073 466 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 MIR3136-201ENST00000583498 78 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC104695.3-201ENST00000604052 296 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC100812.1-201ENST00000607622 580 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 MIR1244-1-201ENST00000612829 85 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC005520.5-201ENST00000613926 164 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 MIR1244-3-201ENST00000635744 85 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 MIR1244-2-201ENST00000636449 85 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 MIR1244-4-202ENST00000636813 85 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS4AQ9UN37 AC005592.1-201ENST00000566527 1640 ntBASIC2.79□□□□□ -1.96
VPS4AQ9UN37 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS4AQ9UN37 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
VPS4AQ9UN37 MTND4P1-201ENST00000457501 1466 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS4AQ9UN37 Y_RNA.314-201ENST00000365114 102 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 RNU1-109P-201ENST00000383960 147 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 SNORA36A-201ENST00000384221 132 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 RNA5SP213-201ENST00000391031 106 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 AC063976.3-201ENST00000426849 329 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 AL121890.1-201ENST00000435457 205 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 AL353705.4-201ENST00000449661 238 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 AP000705.1-201ENST00000454567 350 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 AC087477.1-201ENST00000465747 340 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 AC117440.1-201ENST00000474107 571 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS4AQ9UN37 MRPS36P2-201ENST00000512569 299 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 SNORA31.16-201ENST00000516773 139 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 AC107016.2-201ENST00000547968 190 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS4AQ9UN37 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS4AQ9UN37 AL359854.1-201ENST00000614203 1594 ntBASIC2.78□□□□□ -1.96
VPS4AQ9UN37 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
VPS4AQ9UN37 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS4AQ9UN37 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS4AQ9UN37 Y_RNA.39-201ENST00000362620 98 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 RNU6-137P-201ENST00000363680 108 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 SNORD115-8-201ENST00000363856 82 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 SNORA68.1-201ENST00000364537 132 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 SNORD115-38-201ENST00000365037 82 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 SNORA9.2-201ENST00000365361 133 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 RNU6-1083P-201ENST00000384022 107 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 RNU1-57P-201ENST00000384491 166 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 MIR186-201ENST00000384988 86 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 Y_RNA.592-201ENST00000410274 109 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS4AQ9UN37 AL139132.1-201ENST00000431587 344 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS4AQ9UN37 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS4AQ9UN37 AL135938.1-201ENST00000443141 297 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 AL353752.1-201ENST00000454946 260 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 UBL5P3-201ENST00000475112 231 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 AL121594.1-201ENST00000475906 575 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 RPL36AP48-201ENST00000485521 314 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 HMGB1P35-201ENST00000503360 598 ntBASIC2.77□□□□□ -1.97
VPS4AQ9UN37 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms