Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 DEFB122-202ENST00000569013 197 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 MIR1273C-201ENST00000578669 77 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 AP000787.2-201ENST00000604432 568 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.49□□□□□ -1.69
COL17A1Q9UMD9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 MIR423-201ENST00000362201 94 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 SNORA36C-201ENST00000384289 132 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 AL513475.1-201ENST00000406602 315 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 RNU6-325P-201ENST00000411132 105 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 MTCO1P44-201ENST00000441935 243 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 AL360271.2-201ENST00000447710 161 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 RNU6-1037P-201ENST00000459571 107 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 RAC1P5-201ENST00000512182 576 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 SCGB1D5P-201ENST00000515134 247 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 DNAJC19P2-201ENST00000593340 302 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 AC037487.3-201ENST00000606668 112 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 U4.7-201ENST00000638126 106 ntBASIC4.48□□□□□ -1.69
COL17A1Q9UMD9 RNU1-112P-201ENST00000364401 164 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 RNU6-851P-201ENST00000384565 107 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 Y_RNA.569-201ENST00000384749 103 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 RPL30P13-201ENST00000418873 348 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 RPL26P6-201ENST00000440913 438 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 AC133134.1-201ENST00000466800 359 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 MIR892C-201ENST00000516410 77 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 RNU6-1315P-201ENST00000517187 99 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 AC091144.1-201ENST00000519573 138 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 AC073349.3-201ENST00000617616 186 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL17A1Q9UMD9 RNU6-312P-201ENST00000364629 107 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 RNU6-1144P-201ENST00000384247 104 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 Y_RNA.525-201ENST00000384570 113 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 Y_RNA.571-201ENST00000384753 98 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 RNU6-1275P-201ENST00000391087 107 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AL591034.2-201ENST00000402839 359 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 RNY4P29-201ENST00000410801 97 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AC024067.1-201ENST00000426199 223 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AL592045.1-201ENST00000429867 352 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AC108210.2-201ENST00000503681 201 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 RNU6-548P-201ENST00000517083 115 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AP002826.1-201ENST00000608835 315 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 MIR6715B-201ENST00000637172 77 ntBASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.46□□□□□ -1.7
COL17A1Q9UMD9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 SNORA25.1-201ENST00000362326 128 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 Y_RNA.33-201ENST00000362591 102 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 RNA5SP99-201ENST00000364020 114 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 U8.8-201ENST00000365399 135 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 RNY3P4-201ENST00000384428 101 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 AL357139.1-201ENST00000407792 426 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 AC007395.1-201ENST00000451333 677 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 MTATP6P7-201ENST00000453315 681 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 U8.21-201ENST00000459536 136 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 RNU5E-3P-201ENST00000515913 68 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 RNU6-589P-201ENST00000516485 107 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 AP003327.1-201ENST00000529684 127 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 AL157871.3-201ENST00000557231 293 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 RNA5SP108-201ENST00000605921 117 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 AC015726.2-201ENST00000620112 122 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 AC004925.1-201ENST00000624256 2706 ntBASIC4.45□□□□□ -1.7
COL17A1Q9UMD9 DEFB108F-201ENST00000344638 222 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 RNA5SP502-201ENST00000362694 119 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 Y_RNA.262-201ENST00000364641 102 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 SNORA26.2-201ENST00000390922 122 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 RNU4-30P-201ENST00000410245 143 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 SNORD2.1-201ENST00000458762 69 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 RNA5SP148-201ENST00000516527 94 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 TRAV32-201ENST00000553993 340 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 MIR4659A-201ENST00000580269 81 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 RMST_4.1-201ENST00000616886 107 ntBASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.44□□□□□ -1.7
COL17A1Q9UMD9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms