Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR593-201ENST00000384856 100 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AL353752.1-201ENST00000454946 260 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 RNU6-848P-201ENST00000515948 107 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 RNU6-617P-201ENST00000516147 107 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 RNU6-473P-201ENST00000516164 107 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AC090049.2-201ENST00000550377 109 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 MIR3136-201ENST00000583498 78 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 BNIP3P24-201ENST00000593398 557 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AC016252.1-201ENST00000609721 474 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AC006157.1-201ENST00000611750 366 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 RNY4P16-201ENST00000364768 94 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AL034345.1-201ENST00000407768 123 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AC096531.1-201ENST00000419107 107 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 GPM6BP2-201ENST00000432046 144 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AC093019.1-201ENST00000443135 252 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 GPM6BP1-201ENST00000446387 144 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 OR6C5P-201ENST00000452388 923 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AC092325.1-201ENST00000566449 554 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AL603758.1-201ENST00000618654 241 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 AL159153.1-201ENST00000619688 317 ntBASIC-0.52□□□□□ -2.49
SCN11AQ9UI33 MIR18A-201ENST00000362310 71 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 RNY1P8-201ENST00000383970 114 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 MIR186-201ENST00000384988 86 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 SNORA75.2-201ENST00000391138 150 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 SNORA75.3-201ENST00000391231 150 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 RAP1BP3-201ENST00000407180 549 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 RNA5SP390-201ENST00000410191 113 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 RNU2-59P-201ENST00000410482 191 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 MTCO3P28-201ENST00000513351 515 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 AC027419.1-201ENST00000522976 328 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 AC011451.2-201ENST00000604303 598 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 AL157786.1-207ENST00000627771 695 ntBASIC-0.53□□□□□ -2.49
SCN11AQ9UI33 ENSAP3-201ENST00000312710 333 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 RNU6-223P-201ENST00000362830 107 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 MTND1P21-201ENST00000412991 285 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 AC027644.1-201ENST00000419595 298 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 MTND2P5-201ENST00000432656 1006 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 RNU7-56P-201ENST00000458744 62 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 RNU4-49P-201ENST00000516080 140 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 AP002001.1-203ENST00000534002 267 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 AC009712.1-201ENST00000564938 316 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 AL034555.1-201ENST00000604816 211 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 MIR8064-201ENST00000612863 90 ntBASIC-0.54□□□□□ -2.5
SCN11AQ9UI33 RNU6-655P-201ENST00000362858 107 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 RNU6-487P-201ENST00000365430 104 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 RNU6-929P-201ENST00000384429 107 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 MTCO2P34-201ENST00000421994 607 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 BTF3P15-201ENST00000455606 336 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 AF235103.2-201ENST00000525753 346 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 MIR5695-201ENST00000579717 85 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 SEC63P2-201ENST00000503863 1939 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 SNORA72.2-201ENST00000365028 127 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 RNU6-438P-201ENST00000365561 103 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 SUGT1P1-201ENST00000379514 476 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 RNU6-269P-201ENST00000391077 97 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 TPMTP2-201ENST00000414372 726 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 AC245047.8-201ENST00000456455 284 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 RNU6-927P-201ENST00000516199 100 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 AL391001.1-201ENST00000602747 715 ntBASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.55□□□□□ -2.5
SCN11AQ9UI33 SNORA1.1-201ENST00000364671 133 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 RNU6-534P-201ENST00000364877 106 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 RNA5SP323-201ENST00000391094 133 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 SNORD71-201ENST00000411292 86 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 LARP1BP3-201ENST00000437229 869 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 LINC01399-202ENST00000458450 244 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 AP000797.1-201ENST00000478870 387 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 AC074133.1-201ENST00000515696 183 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 AL157871.3-201ENST00000557231 293 ntBASIC-0.56□□□□□ -2.5
SCN11AQ9UI33 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms