Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RPS29P30-201ENST00000600975 111 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 UCA1.1-201ENST00000620952 75 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 MIR3529-201ENST00000637713 78 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.04□□□□□ -1.92
DKK3Q9UBP4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.04□□□□□ -1.92
DKK3Q9UBP4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
DKK3Q9UBP4 GABRG2-229ENST00000641017 3628 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 AP000560.1-201ENST00000624150 1937 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 ADAM3A-203ENST00000461344 2157 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.27-201ENST00000362540 103 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 SNORD56.1-201ENST00000362913 68 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 RNU1-105P-201ENST00000363470 161 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 SNORD115-32-201ENST00000364079 82 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 U3.13-201ENST00000364804 214 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 SNORA51.11-201ENST00000384442 131 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 SNORA44-201ENST00000384584 132 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 RNU2-25P-201ENST00000411041 191 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 MTCO3P29-201ENST00000432119 779 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AC117440.1-201ENST00000474107 571 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 RN7SL20P-201ENST00000488827 297 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 RNU6-1143P-201ENST00000516125 104 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 RNU6-581P-201ENST00000516214 105 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.668-201ENST00000516233 93 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 RNU6-826P-201ENST00000516827 104 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.706-201ENST00000516933 99 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AC034114.1-201ENST00000520293 285 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AL390123.1-201ENST00000603216 237 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 RMST_6.1-201ENST00000611980 203 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 MIR8062-201ENST00000621515 85 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 AL137790.1-201ENST00000634283 177 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 MIR6733-201ENST00000635723 61 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 MIR3199-2-201ENST00000636243 86 ntBASIC3.03□□□□□ -1.92
DKK3Q9UBP4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
DKK3Q9UBP4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DKK3Q9UBP4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DKK3Q9UBP4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
DKK3Q9UBP4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DKK3Q9UBP4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DKK3Q9UBP4 Y_RNA.214-201ENST00000364201 112 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 RNU6-26P-201ENST00000383985 107 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 RNU6-142P-201ENST00000384019 107 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 RNU6-968P-201ENST00000384076 107 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 RNU6-611P-201ENST00000384276 104 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 RNU6-505P-201ENST00000384427 107 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 MIR1261-201ENST00000408659 82 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 RNA5SP390-201ENST00000410191 113 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 DYNLT3P2-201ENST00000442517 295 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.02□□□□□ -1.93
DKK3Q9UBP4 RNU7-23P-201ENST00000459465 62 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 AC104564.1-201ENST00000493028 407 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 SNORA25.11-201ENST00000515935 105 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 SNORD19.2-201ENST00000516978 73 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 RN7SKP40-201ENST00000517211 242 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 MRPS36P4-201ENST00000534436 298 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 AL442163.3-201ENST00000554110 156 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 AC110588.1-201ENST00000559699 137 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.02□□□□□ -1.93
DKK3Q9UBP4 HMGN2P15-201ENST00000585707 270 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 AC010928.2-201ENST00000588017 287 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.02□□□□□ -1.93
DKK3Q9UBP4 AL355877.2-201ENST00000603670 358 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 AL121655.1-201ENST00000605811 308 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.02□□□□□ -1.93
DKK3Q9UBP4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AL355596.1-201ENST00000565399 3996 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 Z75746.1-201ENST00000440243 2080 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RNU6-858P-201ENST00000362436 107 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RNU1-76P-201ENST00000362903 159 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RNU6-17P-201ENST00000384245 107 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RNU6-18P-201ENST00000384527 107 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RNU6-851P-201ENST00000384565 107 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RNA5SP274-201ENST00000410484 108 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RN7SKP61-201ENST00000410642 295 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
DKK3Q9UBP4 ELOCP20-201ENST00000422460 345 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AC009414.1-201ENST00000427200 443 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AC078809.1-201ENST00000427601 140 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AC108059.2-201ENST00000434626 151 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AL121890.1-201ENST00000435457 205 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms