Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MIR3935-201ENST00000583472 104 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC080078.2-201ENST00000603766 501 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC012493.3-201ENST00000604494 112 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC007014.2-201ENST00000615581 479 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC009033.1-201ENST00000624279 431 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 RNU6-968P-201ENST00000384076 107 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 MIR1283-2-201ENST00000408621 87 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 BX510359.4-201ENST00000423750 193 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 AL353689.1-201ENST00000438895 199 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 RNU6-864P-201ENST00000516256 108 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 AC005296.1-201ENST00000616145 209 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 AC006504.8-201ENST00000621046 635 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 CTSLP2-204ENST00000629029 392 ntBASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
CPSF2Q9P2I0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 Y_RNA.111-201ENST00000363248 100 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 RNU6-784P-201ENST00000384330 106 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 Y_RNA.505-201ENST00000384489 102 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 RNU6-831P-201ENST00000384548 107 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 SNORA67.4-201ENST00000384688 142 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 RNU2-41P-201ENST00000410991 178 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 AC130509.1-201ENST00000464158 433 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 RN7SL274P-201ENST00000492268 272 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 ATP5EP1-201ENST00000510257 156 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 MIR4299-201ENST00000577899 72 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 FGF7P1-201ENST00000582820 288 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 AC243960.4-201ENST00000600532 288 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 AP000907.4-201ENST00000604143 237 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 AC005034.5-201ENST00000604219 466 ntBASIC2.18□□□□□ -2.06
CPSF2Q9P2I0 AL136360.1-201ENST00000503377 1900 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 RNU6-790P-201ENST00000384479 105 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 MIR221-201ENST00000385135 110 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 AC096920.1-201ENST00000423991 241 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 HMGN2P18-201ENST00000450680 270 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 AF186996.7-201ENST00000492781 209 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 RNU6-273P-201ENST00000516937 96 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 AC090517.1-201ENST00000569307 266 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CPSF2Q9P2I0 AC009487.4-201ENST00000624969 3585 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 RNA5SP289-201ENST00000362332 137 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 SNORD116-11-201ENST00000383882 92 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 MIR517A-201ENST00000385001 87 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 RNU6-1093P-201ENST00000391194 107 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 RNA5SP494-201ENST00000410653 129 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 RPS26P42-201ENST00000413485 326 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 DAP3P1-201ENST00000441522 278 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 PCMTD1P1-201ENST00000455560 355 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 AC025754.2-201ENST00000606491 432 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 AC002553.4-201ENST00000616896 331 ntBASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CPSF2Q9P2I0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 MIR597-201ENST00000384968 97 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 RNA5SP465-201ENST00000391195 109 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 AL356432.1-201ENST00000405809 419 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 Z82205.1-201ENST00000428456 297 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 FTH1P25-201ENST00000447665 469 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 AC079354.2-201ENST00000453523 154 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 AC069439.1-201ENST00000494739 167 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.15□□□□□ -2.07
CPSF2Q9P2I0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms