Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 ARL5AP1-201ENST00000418991 388 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 MTCO2P34-201ENST00000421994 607 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC012306.1-201ENST00000423267 114 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 USP9YP28-201ENST00000435142 589 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC099677.2-201ENST00000436385 175 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 snoU13.30-201ENST00000458951 104 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 SNORD13-201ENST00000459299 104 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 RNU6-902P-201ENST00000517212 91 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC068944.2-201ENST00000610373 403 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC087683.2-201ENST00000611384 326 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AL121890.5-201ENST00000620848 304 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 SNORA43.4-201ENST00000629559 138 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 RNU6-903P-201ENST00000391270 109 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 C8orf59P1-201ENST00000429930 303 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 VN1R108P-201ENST00000431580 830 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 CETN4P-201ENST00000432407 469 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 AL445567.1-201ENST00000439121 144 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 AC132479.1-201ENST00000449160 144 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.55□□□□□ -2.16
HPF1Q9NWY4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.55□□□□□ -2.16
HPF1Q9NWY4 MTCYBP35-201ENST00000503630 1137 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.55□□□□□ -2.16
HPF1Q9NWY4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.55□□□□□ -2.16
HPF1Q9NWY4 HIF1AP1-201ENST00000553642 175 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 AL391840.1-201ENST00000571144 367 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 PRR13P7-201ENST00000605538 430 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 MTND4P23-201ENST00000447723 1363 ntBASIC1.55□□□□□ -2.16
HPF1Q9NWY4 RNU1-96P-201ENST00000364163 162 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 RNU6-877P-201ENST00000383868 107 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 RNA5SP213-201ENST00000391031 106 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 RNU6-955P-201ENST00000410497 104 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.54□□□□□ -2.16
HPF1Q9NWY4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.54□□□□□ -2.16
HPF1Q9NWY4 MTCO2P11-201ENST00000431069 680 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 AL358934.1-201ENST00000432346 324 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 AC245047.4-201ENST00000433189 144 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 AC069257.2-201ENST00000441819 155 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 MTCO2P3-201ENST00000442543 421 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 RNU7-63P-201ENST00000459054 62 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.54□□□□□ -2.16
HPF1Q9NWY4 RNA5SP458-201ENST00000516188 119 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 RNA5SP437-201ENST00000517249 129 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 MTATP6P24-201ENST00000576835 677 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.54□□□□□ -2.16
HPF1Q9NWY4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 AC009541.1-201ENST00000438279 2662 ntBASIC1.54□□□□□ -2.16
HPF1Q9NWY4 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HPF1Q9NWY4 RNU6-1093P-201ENST00000391194 107 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.53□□□□□ -2.16
HPF1Q9NWY4 AC090960.1-201ENST00000421072 306 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 MTCO3P29-201ENST00000432119 779 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 AL121601.2-201ENST00000438019 707 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.53□□□□□ -2.16
HPF1Q9NWY4 AC006026.1-201ENST00000444025 1803 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.53□□□□□ -2.16
HPF1Q9NWY4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.53□□□□□ -2.16
HPF1Q9NWY4 RNU7-138P-201ENST00000459479 64 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 RNU6-856P-201ENST00000516959 98 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 RNU6-430P-201ENST00000517078 107 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 SUB1P3-201ENST00000564581 315 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.53□□□□□ -2.16
HPF1Q9NWY4 MIR4255-201ENST00000579351 72 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 MIR5583-1-201ENST00000580941 59 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 MTATP6P3-201ENST00000581686 676 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.53□□□□□ -2.16
HPF1Q9NWY4 AC040904.1-201ENST00000590850 223 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 MTND5P10-201ENST00000603719 1809 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
HPF1Q9NWY4 SNORD1A-201ENST00000364968 72 ntBASIC1.52□□□□□ -2.17
HPF1Q9NWY4 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
HPF1Q9NWY4 RPL30P13-201ENST00000418873 348 ntBASIC1.52□□□□□ -2.17
HPF1Q9NWY4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.52□□□□□ -2.17
HPF1Q9NWY4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.52□□□□□ -2.17
HPF1Q9NWY4 AC099513.1-201ENST00000490423 301 ntBASIC1.52□□□□□ -2.17
HPF1Q9NWY4 AC079140.2-201ENST00000506193 142 ntBASIC1.52□□□□□ -2.17
HPF1Q9NWY4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.52□□□□□ -2.17
HPF1Q9NWY4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.52□□□□□ -2.17
HPF1Q9NWY4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.52□□□□□ -2.17
HPF1Q9NWY4 MIR4760-201ENST00000585040 80 ntBASIC1.52□□□□□ -2.17
HPF1Q9NWY4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.52□□□□□ -2.17
HPF1Q9NWY4 MIR3976-201ENST00000606807 139 ntBASIC1.52□□□□□ -2.17
HPF1Q9NWY4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms