Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RNU6-174P-201ENST00000410406 106 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AP000275.1-201ENST00000411943 390 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 MTCO1P21-201ENST00000416634 589 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 ARL5AP1-201ENST00000418991 388 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC012306.1-201ENST00000423267 114 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC245047.4-201ENST00000433189 144 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 USP9YP28-201ENST00000435142 589 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AL135790.2-201ENST00000437701 267 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC244505.5-201ENST00000443639 207 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.17□□□□□ -2.22
CLN6Q9NWW5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC105417.1-201ENST00000514691 285 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 RNA5SP481-201ENST00000516814 122 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AL137161.1-201ENST00000532231 390 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC068790.2-201ENST00000602601 557 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC005520.5-201ENST00000613926 164 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AL603755.1-201ENST00000619504 163 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.17□□□□□ -2.22
CLN6Q9NWW5 AC091931.1-201ENST00000623488 728 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 SNORA43.4-201ENST00000629559 138 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.17□□□□□ -2.22
CLN6Q9NWW5 RNU6-877P-201ENST00000383868 107 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 MTCO2P34-201ENST00000421994 607 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.16□□□□□ -2.22
CLN6Q9NWW5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.16□□□□□ -2.22
CLN6Q9NWW5 MTND1P27-201ENST00000451117 902 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.16□□□□□ -2.22
CLN6Q9NWW5 C1DP4-201ENST00000455429 424 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 MTCYBP18-201ENST00000501056 747 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AC079140.2-201ENST00000506193 142 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.16□□□□□ -2.22
CLN6Q9NWW5 RN7SKP219-201ENST00000516825 296 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AC005668.1-201ENST00000571142 476 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AC025449.1-201ENST00000603896 529 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 MIR3976-201ENST00000606807 139 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AP001596.2-201ENST00000608410 312 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AC087683.2-201ENST00000611384 326 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 AC072046.2-201ENST00000618366 268 ntBASIC1.16□□□□□ -2.22
CLN6Q9NWW5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
CLN6Q9NWW5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CLN6Q9NWW5 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 SNORA18.2-201ENST00000383865 132 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 RNU6-1093P-201ENST00000391194 107 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.15□□□□□ -2.23
CLN6Q9NWW5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.15□□□□□ -2.23
CLN6Q9NWW5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.15□□□□□ -2.23
CLN6Q9NWW5 RNU1-123P-201ENST00000458950 160 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.15□□□□□ -2.23
CLN6Q9NWW5 RNU6-1041P-201ENST00000516254 102 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 AC019176.1-201ENST00000518519 225 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.15□□□□□ -2.23
CLN6Q9NWW5 AC090821.2-201ENST00000523552 176 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 AP003033.1-201ENST00000527244 415 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 AC012414.6-201ENST00000568241 401 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.15□□□□□ -2.23
CLN6Q9NWW5 MIR3937-201ENST00000580135 106 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 AC009541.1-201ENST00000438279 2662 ntBASIC1.15□□□□□ -2.23
CLN6Q9NWW5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CLN6Q9NWW5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 RNU6-517P-201ENST00000384362 110 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 RNU6-903P-201ENST00000391270 109 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 MRPL35P1-201ENST00000404272 572 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC090960.1-201ENST00000421072 306 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 MTCO3P29-201ENST00000432119 779 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AL358934.1-201ENST00000432346 324 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 CETN4P-201ENST00000432407 469 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 MTND4P32-201ENST00000437189 1237 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC027119.1-201ENST00000440877 241 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC069257.2-201ENST00000441819 155 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AL356010.1-201ENST00000456364 102 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 snoU13.15-201ENST00000459407 104 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 HMGN2P9-201ENST00000476875 229 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC108078.1-201ENST00000508073 725 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 RNU6-856P-201ENST00000516959 98 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC084364.2-201ENST00000546924 395 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 MIR3913-1-201ENST00000577744 102 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 MIR5583-1-201ENST00000580941 59 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC025811.1-201ENST00000604312 472 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 AC095038.3-201ENST00000634439 195 ntBASIC1.14□□□□□ -2.23
CLN6Q9NWW5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
CLN6Q9NWW5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms