Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 FRG2DP-202ENST00000566967 323 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 MIR5092-201ENST00000583139 88 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 MIR5690-201ENST00000583739 73 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 AC005899.2-201ENST00000584353 90 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-595P-201ENST00000363944 107 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 SNORD115-32-201ENST00000364079 82 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.404-201ENST00000383978 102 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-546P-201ENST00000383991 107 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 SNORA12-201ENST00000391162 147 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 RNU2-32P-201ENST00000411193 191 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 OR2AQ1P-201ENST00000451972 200 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 RNA5SP356-201ENST00000515972 94 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 RAB11AP2-201ENST00000545905 639 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 ELOCP29-201ENST00000588193 334 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SLC6A13Q9NSD5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-1159P-201ENST00000362933 107 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 MTCYBP4-201ENST00000401524 249 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 RPS12P2-201ENST00000439728 269 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 AC009238.1-201ENST00000442165 424 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 AC009237.6-201ENST00000446969 424 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 RN7SKP210-201ENST00000459176 261 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 AC018868.1-201ENST00000491307 315 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 RNA5SP384-201ENST00000516615 116 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-1213P-201ENST00000517075 94 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 AC022616.8-201ENST00000533569 253 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 MIR4672-201ENST00000583126 81 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 AC010928.2-201ENST00000588017 287 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 AL117336.2-201ENST00000602435 335 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 7SK.7-201ENST00000603504 247 ntBASIC2.37□□□□□ -2.03
SLC6A13Q9NSD5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.48-201ENST00000362710 103 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 RNU4-73P-201ENST00000363164 141 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 SNORA25B-201ENST00000365507 128 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-1093P-201ENST00000391194 107 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 MIR1294-201ENST00000408503 142 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 RNU2-52P-201ENST00000410680 190 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 AC007064.1-201ENST00000412238 351 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 Z82188.1-201ENST00000436709 154 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 snoU13.30-201ENST00000458951 104 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.653-201ENST00000459091 95 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 AC132942.1-201ENST00000486753 483 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 RPL30P10-201ENST00000488148 337 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 SCARNA16.2-201ENST00000516520 172 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 AL590705.4-201ENST00000532209 134 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 AC093027.1-201ENST00000546698 429 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 RMST_6.1-201ENST00000611980 203 ntBASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SLC6A13Q9NSD5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.259-201ENST00000364619 101 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 U8.10-201ENST00000384260 133 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 SNORD116-29-201ENST00000384516 83 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-310P-201ENST00000384655 107 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 SNORA41-201ENST00000384675 132 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-331P-201ENST00000384724 107 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 RNY4P36-201ENST00000391116 96 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.646-201ENST00000410980 101 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 ARL5AP4-201ENST00000430731 512 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.632-201ENST00000459189 102 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 AC097473.1-201ENST00000508142 408 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 HSPE1P18-201ENST00000517602 280 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 AC005014.2-201ENST00000607795 599 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 AC133104.2-201ENST00000615272 193 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SLC6A13Q9NSD5 Z82195.2-201ENST00000612348 18351 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.67-201ENST00000362870 100 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms