Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AL353997.1-201ENST00000432936 108 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 AL035666.1-201ENST00000446195 348 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 EEF1B2P7-201ENST00000451177 676 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 SNORD109B-201ENST00000458961 67 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 SNORD109A-201ENST00000459128 67 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 AP001324.2-201ENST00000461163 319 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 AC023141.11-201ENST00000508864 202 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 CBX3P7-201ENST00000532876 502 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 AC024581.2-201ENST00000619986 252 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 SNORA43.4-201ENST00000629559 138 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 MIR449A-201ENST00000362113 91 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 Y_RNA.28-201ENST00000362554 111 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 RNU6-859P-201ENST00000362728 107 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 RNU6-595P-201ENST00000363944 107 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 SNORA33.2-201ENST00000365413 134 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 MIR518C-201ENST00000384822 101 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 AL590004.1-201ENST00000405321 300 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 U6atac.2-201ENST00000408644 118 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 RNU6-1140P-201ENST00000410517 106 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 AC124916.1-201ENST00000444020 547 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 AC104389.3-201ENST00000445629 235 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 RNU5B-3P-201ENST00000516601 115 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 RN7SKP295-201ENST00000517264 153 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 MIR3199-1-201ENST00000582434 88 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 MIR4273-201ENST00000582824 84 ntBASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC52A3Q9NQ40 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 RNY1P16-201ENST00000363063 111 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 RNU1-138P-201ENST00000384093 164 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 RNU6-301P-201ENST00000384277 107 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 RNY1P14-201ENST00000384426 108 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 BTF3L4P2-201ENST00000392798 346 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 RNA5SP390-201ENST00000410191 113 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 RNU6-1245P-201ENST00000411130 106 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 HMGN2P35-201ENST00000412164 270 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 MCFD2P1-201ENST00000417812 300 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AC008267.5-201ENST00000424928 265 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 RPL23AP50-201ENST00000434149 455 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 MTND4P19-201ENST00000446659 478 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AL109933.2-201ENST00000452651 260 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AC068781.1-201ENST00000488231 618 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 RPL17P19-201ENST00000489069 552 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AL356157.2-201ENST00000605122 111 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AC069294.1-201ENST00000608397 350 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AC040896.1-201ENST00000613819 479 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 IGHVIII-44-202ENST00000636235 289 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 AC009541.1-201ENST00000438279 2662 ntBASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SLC52A3Q9NQ40 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 RNU6-1141P-201ENST00000364520 107 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 Y_RNA.577-201ENST00000384794 101 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 MIR544A-201ENST00000384855 91 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 RNU6-220P-201ENST00000390919 107 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 RN7SKP61-201ENST00000410642 295 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 RNU2-52P-201ENST00000410680 190 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AL358453.1-201ENST00000422522 250 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 Z98742.2-201ENST00000431564 187 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 RPL30P10-201ENST00000488148 337 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AP002770.2-201ENST00000543613 532 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AC105245.1-201ENST00000581934 244 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AC007485.1-201ENST00000616755 206 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 AL450472.1-202ENST00000637286 180 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 ZNF720P1-201ENST00000562403 1939 ntBASIC2.29□□□□□ -2.04
SLC52A3Q9NQ40 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms