Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNVU1-2-201ENST00000516326 135 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AL137161.1-201ENST00000532231 390 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC005786.1-201ENST00000588553 154 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 MIR8070-201ENST00000616510 88 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC068792.1-201ENST00000621354 417 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 WWP1P1-201ENST00000466609 2769 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 RNU6-60P-201ENST00000364792 103 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 RNU6-1103P-201ENST00000384150 107 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 RNU6-517P-201ENST00000384362 110 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 RNU6-1222P-201ENST00000384615 107 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 RNU2-66P-201ENST00000410650 161 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 AL663109.1-201ENST00000411498 844 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 AL121601.2-201ENST00000438019 707 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 GMFBP1-201ENST00000467831 427 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 AC091133.4-201ENST00000511142 308 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 AC091874.1-201ENST00000511402 339 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 AC010493.1-201ENST00000513479 292 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 AC004223.2-201ENST00000590309 544 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 uc_338.5-201ENST00000611839 155 ntBASIC1.59□□□□□ -2.15
TM9SF3Q9HD45 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TM9SF3Q9HD45 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TM9SF3Q9HD45 RNU5A-6P-201ENST00000384136 116 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 RNA5SP219-201ENST00000390940 113 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 Y_RNA.582-201ENST00000391023 95 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 RNU6-780P-201ENST00000391030 104 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 AL117339.3-201ENST00000418733 162 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 AC105417.1-201ENST00000514691 285 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 LRRC34P2-201ENST00000514850 553 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 SNORA31.16-201ENST00000516773 139 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 AL118558.2-201ENST00000556294 238 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 AC091805.2-201ENST00000603848 235 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 RNU6-85P-201ENST00000605989 107 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 BX248123.2-201ENST00000606318 124 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 Z99129.1-201ENST00000612510 255 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 HULC.1-201ENST00000612720 240 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 uc_338.34-201ENST00000617467 174 ntBASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
TM9SF3Q9HD45 AL161722.3-201ENST00000605789 2983 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 RNU4-75P-201ENST00000364621 146 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 RNU6-43P-201ENST00000384302 107 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AL606923.1-201ENST00000406616 190 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC004965.1-201ENST00000413033 213 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC009474.2-201ENST00000451383 136 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AL163973.1-201ENST00000484753 577 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC021146.2-201ENST00000504736 556 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 HMGN1P13-201ENST00000505795 138 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AK3P2-201ENST00000507976 429 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 RNA5SP490-201ENST00000517141 136 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 MIR3169-201ENST00000578032 83 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC012507.3-201ENST00000603556 477 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC103591.3-201ENST00000608684 209 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AC139792.3-201ENST00000623525 224 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 MIR6863-201ENST00000636112 90 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 MTND4P14-201ENST00000435799 1354 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 MTND5P26-201ENST00000426018 1752 ntBASIC1.57□□□□□ -2.16
TM9SF3Q9HD45 AL391987.6-201ENST00000305671 199 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 RNU6-1285P-201ENST00000363480 105 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 RNU6-414P-201ENST00000363705 104 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 Y_RNA.255-201ENST00000364581 97 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 RNU4-20P-201ENST00000365601 151 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 SNORD37.1-201ENST00000390968 65 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 CALM2P3-201ENST00000400429 449 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AL513185.2-201ENST00000425543 193 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 RNU7-167P-201ENST00000459160 62 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AC114801.2-201ENST00000503825 781 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 HMGB1P29-201ENST00000505659 499 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 RNU6-405P-201ENST00000516637 110 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AC090115.3-201ENST00000553218 849 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms