Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AL590632.1-201ENST00000424289 371 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX25Q9H3E2 CBX3P6-201ENST00000430257 527 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 UBL5P3-201ENST00000475112 231 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 AC104564.1-201ENST00000493028 407 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 MTCO1P29-201ENST00000496868 288 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.11□□□□□ -2.07
SNX25Q9H3E2 RNA5SP137-201ENST00000516833 135 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 MIR3126-201ENST00000577443 74 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 MIR3942-201ENST00000585264 109 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 Z98751.3-201ENST00000604447 521 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 AC122108.2-201ENST00000611946 526 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 AL161423.1-201ENST00000613700 262 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 AC006504.8-201ENST00000621046 635 ntBASIC2.11□□□□□ -2.07
SNX25Q9H3E2 Y_RNA.212-201ENST00000364177 102 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 RNU6-611P-201ENST00000384276 104 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 SNORA46.1-201ENST00000391069 153 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX25Q9H3E2 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 U8.21-201ENST00000459536 136 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AC096745.1-201ENST00000509945 370 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 PTP4A1P4-201ENST00000512479 322 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 SNORA31.25-201ENST00000517242 134 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 MTND4LP26-201ENST00000518144 282 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AC107953.1-201ENST00000522216 297 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AP003033.1-201ENST00000527244 415 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AC023043.2-201ENST00000589678 1026 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AC146944.4-201ENST00000602697 718 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AL133215.3-201ENST00000609801 448 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 PCGEM1.1-201ENST00000613431 131 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SNX25Q9H3E2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SNX25Q9H3E2 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
SNX25Q9H3E2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SNX25Q9H3E2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 RNU6-743P-201ENST00000364151 106 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 AC005741.1-201ENST00000511094 432 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 RNU6-864P-201ENST00000516256 108 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 AC021231.3-201ENST00000558497 370 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 MIR3923-201ENST00000579521 83 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 SNRPGP19-201ENST00000603826 189 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 MIR8076-201ENST00000611401 83 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 AC092794.1-201ENST00000612734 582 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 AC005520.5-201ENST00000613926 164 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 AL136221.1-201ENST00000621449 509 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
SNX25Q9H3E2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SNX25Q9H3E2 Y_RNA.151-201ENST00000363566 112 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 SNORD116-11-201ENST00000383882 92 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 RNU6-378P-201ENST00000384324 107 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 MIR1262-201ENST00000408276 93 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 RNA5SP270-201ENST00000411361 118 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 EIF1AXP1-201ENST00000419267 435 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 NFU1P2-201ENST00000448700 469 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AC021146.2-201ENST00000504736 556 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 RNU6-1088P-201ENST00000516850 104 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AF235103.2-201ENST00000525753 346 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.08□□□□□ -2.08
SNX25Q9H3E2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AL158827.2-201ENST00000602494 330 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 SNRPGP17-201ENST00000603780 214 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AL359314.1-201ENST00000616913 261 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AC009033.1-201ENST00000624279 431 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AL691447.3-201ENST00000635020 330 ntBASIC2.08□□□□□ -2.08
SNX25Q9H3E2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.08□□□□□ -2.08
SNX25Q9H3E2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SNX25Q9H3E2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SNX25Q9H3E2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.07□□□□□ -2.08
SNX25Q9H3E2 RNU6-562P-201ENST00000362731 107 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 RNU5B-2P-201ENST00000363036 113 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 SNORA16B-201ENST00000364674 135 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 RNU4-56P-201ENST00000364700 142 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 SNORA29-201ENST00000384183 140 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 MIR521-1-201ENST00000384902 87 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 HMGN2P39-201ENST00000398005 273 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 287.6 ms