Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 Y_RNA.414-201ENST00000384011 101 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 RNU6-1026P-201ENST00000384465 108 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 MIR221-201ENST00000385135 110 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AL353572.1-201ENST00000442490 417 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AL353705.4-201ENST00000449661 238 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 PCMTD1P1-201ENST00000455560 355 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 RPS23P5-201ENST00000495419 428 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AC008413.1-201ENST00000511864 177 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AC023043.2-201ENST00000589678 1026 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AL096840.1-201ENST00000603287 93 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AC005034.5-201ENST00000604219 466 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AL133215.3-201ENST00000609801 448 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AL138726.1-201ENST00000614873 333 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AL590240.4-201ENST00000616908 390 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AC009831.4-201ENST00000620744 325 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 MIR6852-201ENST00000621699 66 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AC139792.2-201ENST00000624218 587 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AC090617.10-201ENST00000624308 134 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AL160394.1-201ENST00000624765 724 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AC100810.6-201ENST00000638068 285 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CCDC68Q9H2F9 AC245060.5-201ENST00000610778 3293 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 LINC02555-201ENST00000563933 1951 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 RNU6-562P-201ENST00000362731 107 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 RNU5B-2P-201ENST00000363036 113 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 Y_RNA.151-201ENST00000363566 112 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 RNA5SP493-201ENST00000364115 91 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 RNU6-534P-201ENST00000364877 106 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 SNORA32.2-201ENST00000384049 122 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 AC009161.1-201ENST00000417306 376 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 AC123900.1-201ENST00000420390 96 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 AL590632.1-201ENST00000424289 371 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 RNU7-66P-201ENST00000459469 62 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 AC092989.1-201ENST00000481235 277 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 MTCYBP18-201ENST00000501056 747 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 AL773524.1-201ENST00000614065 229 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 AC090517.2-201ENST00000614966 680 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 U1.36-201ENST00000620684 176 ntBASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC68Q9H2F9 Y_RNA.6-201ENST00000362350 114 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 SNORD114-6-201ENST00000364393 72 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 SNORA18.2-201ENST00000383865 132 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 RNU6-95P-201ENST00000384697 107 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 MIR548F1-201ENST00000408667 84 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 AL139413.1-201ENST00000421309 217 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 AC027124.2-201ENST00000428249 105 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 Z82205.1-201ENST00000428456 297 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 AC018634.1-201ENST00000437554 401 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 RNA5SP57-201ENST00000459463 123 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 TOMM22P6-201ENST00000465035 409 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 UBE2DNL-203ENST00000474922 222 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 MIR3672-201ENST00000584290 82 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 AL627230.6-201ENST00000611129 280 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 AC009033.1-201ENST00000624279 431 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 MIR3688-2-201ENST00000636963 87 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 MIR3662-201ENST00000637030 95 ntBASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC68Q9H2F9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 RNA5SP289-201ENST00000362332 137 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 RNU6-784P-201ENST00000384330 106 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 MIR676-201ENST00000390702 67 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 RNA5SP118-201ENST00000410385 109 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 RNA5SP501-201ENST00000410990 112 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 AL035666.1-201ENST00000446195 348 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 MTND1P11-201ENST00000456661 876 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 AC010486.1-201ENST00000511793 424 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 RNU6-718P-201ENST00000516166 105 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 POLR3GP2-201ENST00000588366 668 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC68Q9H2F9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms