Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC099654.7-201ENST00000635788 2127 ntBASIC3.4□□□□□ -1.87
VPS11Q9H270 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS11Q9H270 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS11Q9H270 RNA5SP213-201ENST00000391031 106 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 U3.37-201ENST00000408528 213 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS11Q9H270 OOSP1P1-201ENST00000423265 274 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.39□□□□□ -1.87
VPS11Q9H270 AC009237.7-201ENST00000447357 229 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 RPL26P26-201ENST00000480251 434 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 AK3P2-201ENST00000507976 429 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 RAC1P5-201ENST00000512182 576 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 RPL21P9-201ENST00000556149 474 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS11Q9H270 AC100821.1-201ENST00000523153 2479 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 FAM35CP-201ENST00000554755 2470 ntBASIC3.39□□□□□ -1.87
VPS11Q9H270 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS11Q9H270 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS11Q9H270 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VPS11Q9H270 SNORA25.1-201ENST00000362326 128 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 RNU6-227P-201ENST00000362865 103 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 RNU6-153P-201ENST00000364422 104 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 Y_RNA.261-201ENST00000364631 102 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 Y_RNA.353-201ENST00000365440 108 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 RNU6-72P-201ENST00000384285 79 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 RAB9AP3-201ENST00000412737 573 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AC009414.1-201ENST00000427200 443 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AL353705.1-201ENST00000433468 480 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AL161651.1-201ENST00000440882 223 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 UQCRBP2-201ENST00000447827 297 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AL358232.1-201ENST00000448030 501 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 RAB9AP1-201ENST00000449393 573 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 RPS29P12-201ENST00000460178 152 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AC114982.1-201ENST00000469402 321 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS11Q9H270 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS11Q9H270 RNA5SP272-201ENST00000516095 111 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AC245166.1-201ENST00000521012 253 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS11Q9H270 AC005476.1-201ENST00000554427 397 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AC004832.5-201ENST00000608677 401 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AC091895.1-201ENST00000624494 256 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 SCARNA4-202ENST00000625402 129 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 MTND1P7-201ENST00000632801 297 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AL109809.4-201ENST00000603520 2185 ntBASIC3.38□□□□□ -1.87
VPS11Q9H270 AC010889.1-201ENST00000566193 2666 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VPS11Q9H270 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
VPS11Q9H270 RNA5SP361-201ENST00000362686 118 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RNA5SP197-201ENST00000363357 119 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RNA5SP205-201ENST00000364653 136 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RNU6-1280P-201ENST00000365211 107 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 Y_RNA.343-201ENST00000365354 112 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RNU6-257P-201ENST00000410238 98 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 AC073901.1-201ENST00000462471 408 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RNU5F-8P-201ENST00000515941 111 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RN7SKP18-201ENST00000516005 275 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RNU6-426P-201ENST00000516464 97 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 SNORA27.4-201ENST00000516650 95 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RPL23AP88-201ENST00000605759 454 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 AC073349.3-201ENST00000617616 186 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
VPS11Q9H270 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS11Q9H270 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS11Q9H270 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
VPS11Q9H270 AC004944.1-201ENST00000517807 3059 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS11Q9H270 AP003122.5-201ENST00000527668 3766 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
VPS11Q9H270 RNU1-100P-201ENST00000365255 165 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 Y_RNA.400-201ENST00000383963 111 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 Y_RNA.488-201ENST00000384403 102 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AL035461.1-201ENST00000421490 332 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AL358075.3-201ENST00000426289 226 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AC016700.2-201ENST00000446011 156 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 IFNA11P-201ENST00000446352 526 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.36□□□□□ -1.87
VPS11Q9H270 MRPS10P1-201ENST00000448483 130 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 RPL23AP3-201ENST00000453844 468 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 SNORD105B-201ENST00000458770 79 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS11Q9H270 RNA5SP380-201ENST00000517190 98 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 SCARNA20.6-201ENST00000517251 106 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS11Q9H270 AP004607.1-201ENST00000524456 203 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AK6P2-201ENST00000549020 471 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AC008121.1-201ENST00000603244 268 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AC037487.3-201ENST00000606668 112 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS11Q9H270 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 UCA1.1-201ENST00000620952 75 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 CR392039.5-201ENST00000623201 510 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 AC002064.3-201ENST00000623448 346 ntBASIC3.36□□□□□ -1.87
VPS11Q9H270 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS11Q9H270 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms