Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 Y_RNA.376-201ENST00000365638 108 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 Y_RNA.396-201ENST00000383949 103 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 Y_RNA.439-201ENST00000384119 94 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 RNA5SP213-201ENST00000391031 106 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 RNU1-101P-201ENST00000391171 127 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 RNU1-139P-201ENST00000391307 165 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 CYCSP48-201ENST00000417124 323 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 LINC01399-202ENST00000458450 244 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AC090525.1-201ENST00000479116 478 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AC067942.3-201ENST00000512025 362 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 RNU6-408P-201ENST00000515910 100 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 Y_RNA.668-201ENST00000516233 93 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 RNU6-1012P-201ENST00000516606 109 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 RNU6-1271P-201ENST00000517049 105 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AC027288.2-201ENST00000553028 243 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AL078605.1-201ENST00000603529 500 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 Y_RNA.772-201ENST00000606692 102 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AC005296.1-201ENST00000616145 209 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AC006386.2-201ENST00000624491 75 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AC012005.1-201ENST00000624575 75 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.93□□□□□ -1.94
AMBRA1Q9C0C7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 RNU6-1010P-201ENST00000362757 107 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 RNU6-281P-201ENST00000384212 103 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 RNU6-159P-201ENST00000391080 106 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 MIR1289-1-201ENST00000408836 144 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 RN7SKP123-201ENST00000410732 291 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 RN7SKP58-201ENST00000411010 305 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 AP000705.1-201ENST00000454567 350 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 snoU13.6-201ENST00000458785 104 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 RPL27AP5-201ENST00000469428 449 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 RNA5SP385-201ENST00000515947 110 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 RNU6-567P-201ENST00000516746 107 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 MIR3136-201ENST00000583498 78 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 YPEL5P2-201ENST00000605553 359 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 AC240442.1-201ENST00000616055 283 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 U6.104-201ENST00000637979 90 ntBASIC2.92□□□□□ -1.94
AMBRA1Q9C0C7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 SNORD115-8-201ENST00000363856 82 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 Y_RNA.288-201ENST00000364854 92 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 SNORD115-38-201ENST00000365037 82 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 Y_RNA.461-201ENST00000384263 103 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 RNU6-472P-201ENST00000384299 107 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 Y_RNA.476-201ENST00000384347 108 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 MIR181B1-201ENST00000385240 110 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 MT-TW-201ENST00000387382 68 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 AC108059.2-201ENST00000434626 151 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 RPS15AP7-201ENST00000439294 405 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 AC096638.1-201ENST00000444678 216 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 AP004217.1-201ENST00000480579 346 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 RNU5F-2P-201ENST00000516066 82 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 SNORA31.16-201ENST00000516773 139 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 AP003733.2-201ENST00000529409 171 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 AC093023.1-201ENST00000547375 507 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 MIR4659A-201ENST00000580269 81 ntBASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
AMBRA1Q9C0C7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
AMBRA1Q9C0C7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
AMBRA1Q9C0C7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-212P-201ENST00000362642 104 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 RNU4-56P-201ENST00000364700 142 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-318P-201ENST00000384283 103 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 MIR487A-201ENST00000385009 80 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 MIR10B-201ENST00000385011 110 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 SNORD78.2-201ENST00000391076 69 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 RNA5SP354-201ENST00000391247 136 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 BMS1P22-201ENST00000414726 313 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 TRIAP1P1-201ENST00000427062 225 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms