Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.7□□□□□ -2.3
NKX6-2Q9C056 RPS6P15-201ENST00000431996 751 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.7□□□□□ -2.3
NKX6-2Q9C056 RPS4XP11-201ENST00000446897 772 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.7□□□□□ -2.3
NKX6-2Q9C056 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 RNU6-311P-201ENST00000516224 102 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 RNU6-567P-201ENST00000516746 107 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 RNU2-46P-201ENST00000517038 113 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.7□□□□□ -2.3
NKX6-2Q9C056 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.7□□□□□ -2.3
NKX6-2Q9C056 AC008088.1-201ENST00000580993 280 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 VN1R107P-201ENST00000601784 209 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 AC002044.1-201ENST00000606707 158 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.7□□□□□ -2.3
NKX6-2Q9C056 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 AL157834.3-201ENST00000615543 103 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 MIR7844-201ENST00000616161 122 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 AC022418.1-201ENST00000624118 445 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 MIR338-201ENST00000636369 67 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
NKX6-2Q9C056 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
NKX6-2Q9C056 RNU1-124P-201ENST00000363861 145 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 RNY4P34-201ENST00000364779 95 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 RNU6-1029P-201ENST00000384109 107 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 RNU6-195P-201ENST00000411352 109 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.69□□□□□ -2.3
NKX6-2Q9C056 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.69□□□□□ -2.3
NKX6-2Q9C056 UBE2D3P4-201ENST00000441973 436 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.69□□□□□ -2.3
NKX6-2Q9C056 AL513124.1-201ENST00000450410 614 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 SNORD116-28-201ENST00000516123 91 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 RNU6-165P-201ENST00000517170 99 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 SUMO2P16-201ENST00000519475 264 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.69□□□□□ -2.3
NKX6-2Q9C056 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.69□□□□□ -2.3
NKX6-2Q9C056 MTND1P8-201ENST00000571424 950 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.69□□□□□ -2.3
NKX6-2Q9C056 AP001836.1-201ENST00000604675 523 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 AC064872.1-201ENST00000604823 1072 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 AL356157.2-201ENST00000605122 111 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.69□□□□□ -2.3
NKX6-2Q9C056 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 BX322639.1-202ENST00000423987 2213 ntBASIC0.69□□□□□ -2.3
NKX6-2Q9C056 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
NKX6-2Q9C056 RNU6-534P-201ENST00000364877 106 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 U8.10-201ENST00000384260 133 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 MIR1283-1-201ENST00000408494 87 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC106883.1-201ENST00000418805 562 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC090960.1-201ENST00000421072 306 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC013410.2-201ENST00000422627 201 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AL596276.1-201ENST00000434465 418 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC016717.1-201ENST00000448918 286 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.68□□□□□ -2.3
NKX6-2Q9C056 snoU13.6-201ENST00000458785 104 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 HMGN1P12-201ENST00000499125 195 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC067942.3-201ENST00000512025 362 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.68□□□□□ -2.3
NKX6-2Q9C056 MIR548AB-201ENST00000584917 84 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC008751.2-201ENST00000597885 980 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 RPL17P51-201ENST00000605218 238 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC008945.2-201ENST00000606056 604 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.68□□□□□ -2.3
NKX6-2Q9C056 AL391834.2-201ENST00000609982 546 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.68□□□□□ -2.3
NKX6-2Q9C056 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
NKX6-2Q9C056 snoU2-30.2-201ENST00000362805 70 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 RNU6-266P-201ENST00000364225 107 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 SNORA72.2-201ENST00000365028 127 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 MIR454-201ENST00000390180 115 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
NKX6-2Q9C056 RNA5SP109-201ENST00000391010 116 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 RNU6-1093P-201ENST00000391194 107 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 RNU4-46P-201ENST00000410818 138 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC010099.3-201ENST00000423896 409 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 GPR143P-201ENST00000434155 205 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC079382.1-201ENST00000493346 557 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC008628.2-201ENST00000502605 298 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC010486.2-201ENST00000505572 483 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 RNU2-69P-201ENST00000516061 100 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 SNORA25.17-201ENST00000517184 124 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 CYCSP23-201ENST00000519781 313 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AP003461.1-201ENST00000528866 78 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 MIR4742-201ENST00000581069 85 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 MIR4661-201ENST00000582720 75 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 MIR4753-201ENST00000585119 83 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AL158827.2-201ENST00000602494 330 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AL929325.1-201ENST00000603096 117 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AL391646.1-201ENST00000603860 190 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC025811.1-201ENST00000604312 472 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms