Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 MIR449A-201ENST00000362113 91 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.26-201ENST00000362539 101 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 SNORA14A-201ENST00000364773 135 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 RNU6-806P-201ENST00000365147 105 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 SNORD21-201ENST00000383953 95 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 AL139281.1-201ENST00000422120 335 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 AC098614.2-201ENST00000426040 255 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 RPEP5-201ENST00000441137 268 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 TRBVB-201ENST00000477100 408 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 RNA5SP165-201ENST00000517142 115 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 AC022868.1-201ENST00000517767 391 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 AL442163.3-201ENST00000554110 156 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 MIR3910-1-201ENST00000580936 111 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 AC023043.3-201ENST00000593113 385 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 AC096772.1-201ENST00000609146 564 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.21□□□□□ -1.89
SALL3Q9BXA9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.21□□□□□ -1.89
SALL3Q9BXA9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SALL3Q9BXA9 AC007785.2-201ENST00000598627 1916 ntBASIC3.21□□□□□ -1.9
SALL3Q9BXA9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.21□□□□□ -1.9
SALL3Q9BXA9 AC062016.1-201ENST00000355719 319 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 MIR335-201ENST00000362173 94 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.20-201ENST00000362479 113 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 RNU6-212P-201ENST00000362642 104 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 RNU6-774P-201ENST00000363238 107 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 RNU1-100P-201ENST00000365255 165 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 CD24P4-201ENST00000382840 243 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 SNORA12.2-201ENST00000391040 156 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 RNU2-38P-201ENST00000410856 79 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 AC004383.1-201ENST00000438135 289 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 MTND4LP30-201ENST00000454092 297 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 AC139453.3-201ENST00000493276 369 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.2□□□□□ -1.9
SALL3Q9BXA9 RNU7-175P-201ENST00000515915 61 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 RNU6-572P-201ENST00000516724 80 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 RNU6-703P-201ENST00000516946 107 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 RNU6-789P-201ENST00000517105 102 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 AMZ2P1-203ENST00000565833 850 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 ELOCP29-201ENST00000588193 334 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 SCARNA4-202ENST00000625402 129 ntBASIC3.2□□□□□ -1.9
SALL3Q9BXA9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
SALL3Q9BXA9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.2□□□□□ -1.9
SALL3Q9BXA9 RNU5E-7P-201ENST00000365290 117 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.458-201ENST00000384240 102 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 MIR592-201ENST00000384959 97 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RNU2-52P-201ENST00000410680 190 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC007919.1-201ENST00000429380 217 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 MTND3P9-201ENST00000429526 346 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 SNRPEP9-201ENST00000436794 238 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 Z82210.1-201ENST00000440037 231 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 PIGFP3-201ENST00000441918 722 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC067942.3-201ENST00000512025 362 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RNA5SP356-201ENST00000515972 94 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 SNORA31.6-201ENST00000516241 130 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.700-201ENST00000516806 100 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC007375.1-201ENST00000554513 578 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 SDR42E1P4-201ENST00000620894 481 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.60-201ENST00000362831 98 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.291-201ENST00000364886 113 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.416-201ENST00000384014 113 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RNU6-187P-201ENST00000384139 106 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RNU6-72P-201ENST00000384285 79 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 SNORD115-46-201ENST00000390982 71 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 SNORD58.1-201ENST00000391313 66 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 MIR548H3-201ENST00000408771 118 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RNU6-130P-201ENST00000411112 103 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AP000275.1-201ENST00000411943 390 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC007560.1-201ENST00000426912 237 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 NDUFB4P6-201ENST00000436819 366 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC124916.1-201ENST00000444020 547 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC006026.2-201ENST00000457376 180 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 SNORD109B-201ENST00000458961 67 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 SNORD109A-201ENST00000459128 67 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RPS23P5-201ENST00000495419 428 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RNU6-397P-201ENST00000516226 104 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 RNU6-1282P-201ENST00000516735 96 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC010186.2-204ENST00000537668 439 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.19□□□□□ -1.9
SALL3Q9BXA9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 AL138880.2-201ENST00000616214 239 ntBASIC3.19□□□□□ -1.9
SALL3Q9BXA9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
SALL3Q9BXA9 AC103988.1-201ENST00000566382 2177 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SALL3Q9BXA9 RNU6-428P-201ENST00000362942 107 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.405-201ENST00000383979 100 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms