Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 RNU6-834P-201ENST00000362367 110 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 Y_RNA.293-201ENST00000364908 93 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 RPL21P17-201ENST00000397467 475 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 U3.40-201ENST00000408706 208 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 GOT2P5-201ENST00000433995 546 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 RPL23AP58-201ENST00000440453 469 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 RPS27P26-201ENST00000494583 239 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 RNU6-107P-201ENST00000516643 102 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 RNU6-1234P-201ENST00000516877 103 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AC136628.3-201ENST00000521868 290 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 CYP4A27P-201ENST00000567218 190 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 MIR4429-201ENST00000580105 73 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AL162713.1-201ENST00000604480 262 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AL137849.1-201ENST00000604767 169 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 MIR92B-201ENST00000607575 96 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AC013791.1-201ENST00000616619 62 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AC008873.1-201ENST00000625051 138 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 ADAM3A-203ENST00000461344 2157 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 AC010733.2-201ENST00000589496 5702 ntBASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP3Q9BWW4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 RNU6-799P-201ENST00000363567 107 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 RNU6-1264P-201ENST00000383891 107 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 MIR626-201ENST00000385032 94 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 MIR549A-201ENST00000385268 96 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 SNORD37.2-201ENST00000391075 66 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 MIR208B-201ENST00000401172 77 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 RNU2-52P-201ENST00000410680 190 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 AL035423.1-201ENST00000420331 213 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 AC099548.1-201ENST00000421443 426 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 AC090525.1-201ENST00000479116 478 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 YWHAEP4-201ENST00000505390 198 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 RAC1P2-201ENST00000511164 579 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 RNU1-95P-201ENST00000516357 160 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 RNU1-128P-201ENST00000516704 160 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 SNORA31.16-201ENST00000516773 139 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 RNU2-12P-201ENST00000517216 168 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 AP002001.1-203ENST00000534002 267 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 AC090877.1-201ENST00000561418 344 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 AC112200.1-201ENST00000625015 234 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 AC012442.3-202ENST00000636742 206 ntBASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSBP3Q9BWW4 MAPK10-372ENST00000641954 3413 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 AC010329.5-201ENST00000623497 2174 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 RNU6-801P-201ENST00000364087 105 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 Y_RNA.287-201ENST00000364853 94 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 RNU6-487P-201ENST00000365430 104 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 RNA5SP167-201ENST00000365461 116 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 RNU6-1056P-201ENST00000383996 107 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 Y_RNA.420-201ENST00000384043 110 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 SNORA5A-201ENST00000384111 134 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 MIR670-201ENST00000390142 98 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 RNA5SP424-201ENST00000390988 115 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 U3.26-201ENST00000391236 204 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 EI24P2-201ENST00000397776 1076 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 RNU6-710P-201ENST00000410424 105 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 BPY2DP-201ENST00000422208 265 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 RN7SKP18-201ENST00000516005 275 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 RNA5SP208-201ENST00000516156 78 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 RNU6-581P-201ENST00000516214 105 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 AC112693.2-201ENST00000556538 232 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 AC090897.2-201ENST00000581715 130 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 MIR3136-201ENST00000583498 78 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 AC008739.3-201ENST00000603262 127 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 SNORA62.6-201ENST00000606322 83 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 AC002543.1-201ENST00000299783 1954 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms